Commits · e5dd34df4eb99141938ae51d3ec7b9d7dd0588b6 · Chaos / Cutandrun

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Mar 14, 2022
- Fixed bam scaling BPM test · e5dd34df
  Chris Cheshire authored Mar 14, 2022
  
  e5dd34df
- Added retrys to all CI · f8c4cebf
  Chris Cheshire authored Mar 14, 2022
  
  f8c4cebf
- Changed schema · 4185a415
  Chris Cheshire authored Mar 14, 2022
  
  4185a415
- Updated CI script · 96b72a2a
  Chris Cheshire authored Mar 14, 2022
  
  96b72a2a
- Expanded peak caller tests · d7372d43
  Chris Cheshire authored Mar 14, 2022
  
  d7372d43
- Updated modules · 4128c703
  Chris Cheshire authored Mar 14, 2022
  
  4128c703
- Removed TODO · 5124619f
  Chris Cheshire authored Mar 14, 2022
  
  5124619f
- Updated schema · b9db2b7d
  Chris Cheshire authored Mar 14, 2022
  
  b9db2b7d
- Whitespace fixes · 64b167b2
  Chris Cheshire authored Mar 14, 2022
  
  64b167b2
- Merge branch 'v2.0' into dev · a35d7a4b
  Chris Cheshire authored Mar 14, 2022
  
  a35d7a4b
- Merge branch 'chris-feat' into v2.0 · 6300d7d6
  Chris Cheshire authored Mar 14, 2022
  
  6300d7d6
- Added bam scaling tests · 1ec9c629
  Chris Cheshire authored Mar 14, 2022
  
  1ec9c629
- removed RPGC as an option · deed4927
  Chris Cheshire authored Mar 14, 2022
  
  deed4927
Mar 08, 2022
- Added ability to separately scale igg factor for deeptool normalisation · 065dca4e
  Chris Cheshire authored Mar 08, 2022
  
  065dca4e
- Changed to same strategy for spikein · c5dccdbb
  Chris Cheshire authored Mar 08, 2022
  
  c5dccdbb
- Altered alignment strategy based on whether trimming is skipped or not · b7f23787
  Chris Cheshire authored Mar 08, 2022
  
  b7f23787
Mar 07, 2022
- Now outputs fna files · 3b244bce
  Chris Cheshire authored Mar 07, 2022
  
  3b244bce
- fixed gff output · 338acf04
  Chris Cheshire authored Mar 07, 2022
  
  338acf04
- Merge branch 'v2.0' into chris-feat · 5968d8b5
  Chris Cheshire authored Mar 07, 2022
  
  5968d8b5
- Removed changes as you cant use endsWith · fb403f62
  Chris Cheshire authored Mar 07, 2022
  
  fb403f62
- fixed syntax error · 52514e55
  Chris Cheshire authored Mar 07, 2022
  
  52514e55
- Restricted some prepare genome parameter labels · 26516ba2
  Chris Cheshire authored Mar 07, 2022
  
  26516ba2
Mar 05, 2022
- Added auto-optional scale factor reporting · 1249e3f3
  Chris Cheshire authored Mar 05, 2022
  
  1249e3f3
Mar 04, 2022
- Merge branch 'chris-feat' into v2.0 · 469505c2
  Chris Cheshire authored Mar 04, 2022
  
  469505c2
- removed cache · 48fb5573
  Chris Cheshire authored Mar 04, 2022
  
  48fb5573
- Added peaking calling normalisation options · b8cfd2b0
  Chris Cheshire authored Mar 04, 2022
  
  b8cfd2b0
Mar 03, 2022
- Added commenting · ff5bcd9b
  Chris Cheshire authored Mar 03, 2022
  
  ff5bcd9b
- Added tests for conensus peaks and a parameter check · 408bf203
  Chris Cheshire authored Mar 03, 2022
  
  408bf203
- Added jupyter test folders · 6b7e1c7b
  Chris Cheshire authored Mar 03, 2022
  
  6b7e1c7b
Feb 28, 2022
- Changed node version back for template compliance · a148402a
  Chris Cheshire authored Feb 28, 2022
  
  a148402a
- Fixed markdown · b65e65cf
  Chris Cheshire authored Feb 28, 2022
  
  b65e65cf
- Switched to node.js 14 · 7ee2ea2f
  Chris Cheshire authored Feb 28, 2022
  
  7ee2ea2f
- fixed test · c94de33c
  Chris Cheshire authored Feb 28, 2022
  
  c94de33c
- · 47e00e34
  Chris Cheshire authored Feb 28, 2022
  47e00e34
Feb 26, 2022
- Fixed tests · 2c927054
  Chris Cheshire authored Feb 25, 2022
  
  2c927054
- Fixed test · a9ee9e44
  Chris Cheshire authored Feb 25, 2022
  
  a9ee9e44
- linting now passes · b5343f17
  Chris Cheshire authored Feb 25, 2022
  
  b5343f17
Feb 25, 2022
- Fixed picard arg errors · 280257df
  Chris Cheshire authored Feb 25, 2022
  
  280257df
- Module updates · d336af55
  Chris Cheshire authored Feb 25, 2022
  
  d336af55
- Module meta updates · 4c824cac
  Chris Cheshire authored Feb 25, 2022
  
  4c824cac

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Commits · e5dd34df4eb99141938ae51d3ec7b9d7dd0588b6