Updated schema (b9db2b7d) · Commits · Chaos / Cutandrun

nextflow_schema.json

+13 −7

Original line number	Diff line number	Diff line
		@@ -213,12 +213,24 @@
		"fa_icon": "fas fa-align-justify",
		"description": "Normalisation constant"
		},
		"normalisation_binsize": {
		"type": "integer",
		"default": 1
		},
		"igg_scale_factor": {
		"type": "integer",
		"default": 1
		},
		"igg_control": {
		"type": "boolean",
		"default": true,
		"fa_icon": "fas fa-align-justify",
		"description": "Specifies if the samplesheet contains an IgG control"
		},
		"normalisation_mode": {
		"type": "string",
		"default": "Spikein"
		},
		"peak_threshold": {
		"type": "number",
		"default": 0.05,
		@@ -249,8 +261,7 @@
		"default": 2700000000
		},
		"run_narrow_peak": {
		"type": "boolean",
		"default": "false"
		"type": "boolean"
		},
		"consensus_peak_mode": {
		"type": "string",
		@@ -310,11 +321,6 @@
		"fa_icon": "fas fa-align-justify",
		"description": "Skips de-duplication"
		},
		"skip_scale": {
		"type": "boolean",
		"description": "Skips scalefactor normalisation",
		"fa_icon": "fas fa-align-justify"
		},
		"skip_reporting": {
		"type": "boolean",
		"fa_icon": "fas fa-align-justify",