Commit b5343f17 authored by Chris Cheshire's avatar Chris Cheshire
Browse files

linting now passes

parent 280257df

nextflow.config

+1 −1
Original line number Diff line number Diff line
@@ -100,7 +100,7 @@ params { 
    igenomes_ignore            = false

    validate_params            = true

    show_hidden_params         = false

    schema_ignore_params       = 'genomes'

    schema_ignore_params       = 'genomes,callers,dedup_control_only,run_igv,run_peak_plotting,run_multiqc,run_deep_tools,run_reporting,run_consensus_all,run_peak_calling,run_remove_dups,run_mark_dups,run_q_filter,run_alignment,run_trim_galore_fastqc,run_cat_fastq,run_input_check,run_genome_prep'

    enable_conda               = false

    singularity_pull_docker_container = false

nextflow_schema.json

+6 −2
Original line number Diff line number Diff line
@@ -238,7 +238,7 @@ 
                },

                "peakcaller": {

                    "type": "string",

                    "default": null

                    "default": "None"

                },

                "macs2_pvalue": {

                    "type": "number",
@@ -249,8 +249,12 @@ 
                    "default": 2700000000

                },

                "run_narrow_peak": {

                    "type": "string",

                    "type": "boolean",

                    "default": "false"

                },

                "consensus_peak_mode": {

                    "type": "string",

                    "default": "group"

                }

            },

            "fa_icon": "fas fa-cog"

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