Commits · 314f9c6b0981c51b78a51a504398d7c194f45787 · github_fork / Universc · GitLab

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Mar 18, 2020
- add whitelist for inDrop-v3 https://github.com/indrops/indrops/issues/32 · 314f9c6b
  TomKellyGenetics authored Mar 18, 2020
  
  314f9c6b
- add support for SureCell configuration · 851a0751
  TomKellyGenetics authored Mar 18, 2020
  
  851a0751
- alias for 1cellbio · 8a193441
  TomKellyGenetics authored Mar 18, 2020
  
  8a193441
- remove adapter only if detected · 374dae11
  TomKellyGenetics authored Mar 18, 2020
  
  374dae11
- add support for inDrops version 3 configuration · d0f3c53d
  TomKellyGenetics authored Mar 18, 2020
  
  d0f3c53d
- warning if dual-indexed technology is used (inDrops-v3, Sci-Seq, Smart-Seq) · 4e8b162f
  TomKellyGenetics authored Mar 18, 2020
  
  4e8b162f
- warning if using Smart-Seq3 · 2d210208
  TomKellyGenetics authored Mar 18, 2020
  
  2d210208
- add support for CEL-Seq2 with barcode and UMI swap · d598dd8a
  TomKellyGenetics authored Mar 18, 2020
  
  d598dd8a
- add support for Sci-Seq (single-cell combinatorial indexing) · 9cd1c0cb
  TomKellyGenetics authored Mar 18, 2020
  
  9cd1c0cb
- update checks to allow all documented technologies · 1ebeec1e
  TomKellyGenetics authored Mar 18, 2020
  
  1ebeec1e
Mar 17, 2020
- Update README.md · da5bbfc7
  TomKellyGenetics authored Mar 17, 2020
  
  da5bbfc7
- support longer UMIs with SC3Pv3 chemistry and warn from non-UMI kits · 24ea5d0e
  TomKellyGenetics authored Mar 17, 2020
  
  24ea5d0e
- add support for Smart-Seq version 2-UMI (intermeidiate) and 3 · 23f11fb4
  TomKellyGenetics authored Mar 17, 2020
  
  23f11fb4
Mar 16, 2020
- add support for inDrops version 1 and 2 · 65876a79
  TomKellyGenetics authored Mar 16, 2020
  
  65876a79
- import barcodes from kallisto bustools https://github.com/BUStools/bustools/issues/4 · 5b026931
  TomKellyGenetics authored Mar 16, 2020
  
  5b026931
- add support for CEL-Seq and Scrub-Seq · 16ef11db
  TomKellyGenetics authored Mar 16, 2020
  
  16ef11db
- add support for Quartz-Seq-2 barcode whitelists · 2e0174c8
  TomKellyGenetics authored Mar 16, 2020
  
  2e0174c8
- enable generating barcodes in script · eeb885f8
  TomKellyGenetics authored Mar 16, 2020
  
  eeb885f8
- enable generating barcodes in script · 72264521
  TomKellyGenetics authored Mar 16, 2020
  
  72264521
- correct handling custom inputs · 256fb368
  TomKellyGenetics authored Mar 16, 2020
  
  256fb368
- correct handling custom inputs · 55c96162
  TomKellyGenetics authored Mar 16, 2020
  
  55c96162
- correct handling custom inputs · 361c41b7
  TomKellyGenetics authored Mar 16, 2020
  
  361c41b7
- correct handling custom inputs · 4c8a1b0d
  TomKellyGenetics authored Mar 16, 2020
  
  4c8a1b0d
- correct handling custom inputs · 554dea35
  TomKellyGenetics authored Mar 16, 2020
  
  554dea35
- correct handling custom inputs · 6abaaf25
  TomKellyGenetics authored Mar 16, 2020
  
  6abaaf25
- correct quart-seq2 settings · 9f5ecb35
  TomKellyGenetics authored Mar 16, 2020
  
  9f5ecb35
- generate automatic whitelist of barcode length for custom inputs · 9f81202d
  TomKellyGenetics authored Mar 16, 2020
  
  9f81202d
- add settings for Quartz-Seq2 · 52d1d64b
  TomKellyGenetics authored Mar 16, 2020
  
  52d1d64b
- update manual for expanded technologies · a84be0c8
  TomKellyGenetics authored Mar 16, 2020
  
  a84be0c8
Mar 15, 2020
- call tests separately · bcd468e4
  TomKellyGenetics authored Mar 15, 2020
  
  bcd468e4
- separate test and build · a7f52425
  TomKellyGenetics authored Mar 15, 2020
  
  a7f52425
Mar 14, 2020
- update docker build · fc2f2d20
  TomKellyGenetics authored Mar 13, 2020
  
  fc2f2d20
Mar 13, 2020
- correct test data · b19a16f1
  TomKellyGenetics authored Mar 13, 2020
  
  b19a16f1
- update for testing with auto chemistry and custom barcodes · af4d68e3
  TomKellyGenetics authored Mar 13, 2020
  
  af4d68e3
- add checks for custom barcodes · 1d4206b4
  TomKellyGenetics authored Mar 13, 2020
  
  1d4206b4
- correct clearing lock file after run · e23adee1
  TomKellyGenetics authored Mar 13, 2020
  
  e23adee1
- correct auto setup and exit · 6bee7453
  TomKellyGenetics authored Mar 13, 2020
  
  6bee7453
- set default chemistry for 10x to auto · 79979163
  TomKellyGenetics authored Mar 13, 2020
  
  79979163
- update git LFS · 4a1497f8
  TomKellyGenetics authored Mar 13, 2020
  
  4a1497f8
- enable version 3 chemistry for 10x · 2d05ad23
  TomKellyGenetics authored Mar 13, 2020
  
  2d05ad23

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