Commits · ff8fb17e20eb2b67cda754c40432f3f0e556c476 · github_fork / Chromap

Browse files

Dec 09, 2021
- Only warn the users when whitelist is NA. · ff8fb17e
  Haowen Zhang authored Dec 08, 2021
  
  ff8fb17e
Dec 08, 2021
- Make num_reference_sequences unconst and shared in omp to compile. · 114d6754
  Haowen Zhang authored Dec 02, 2021
  
  114d6754
- Reduce the number of function parameters. · 935d24df
  Haowen Zhang authored Dec 02, 2021
  935d24df
- More refactors. · 8f6e6b3a
  Haowen Zhang authored Dec 01, 2021
  8f6e6b3a
- First step towards this monster. · 6e81245c
  Haowen Zhang authored Nov 28, 2021
  6e81245c
- Move temp mapping file handle to a separate header. · 5ceb935b
  Haowen Zhang authored Nov 28, 2021
  
  5ceb935b
- Put different format classes into separate files. · df421278
  Haowen Zhang authored Nov 28, 2021
  
  df421278
Nov 29, 2021
- Support asan=1 for make · 6770b8aa
  Heng Li authored Nov 28, 2021
  
  6770b8aa
Nov 26, 2021
- Format code. · c5c4994b
  Haowen Zhang authored Nov 25, 2021
  
  c5c4994b
Nov 18, 2021
- Format tab to spaces · 4fc3f1ac
  Li authored Nov 17, 2021
  
  4fc3f1ac
- Check whether the barcode whitelist matches the data and add the option to check this step. · eeee74c4
  Li authored Nov 17, 2021
  
  eeee74c4
- Change the omp statement order with cache update. · 9a2e3f17
  Li authored Nov 17, 2021
  
  9a2e3f17
Nov 10, 2021
- Update README.md · a2eae852
  Haowen Zhang authored Nov 09, 2021
  
  a2eae852
Nov 09, 2021
- Update version. · a24b7131
  Haowen Zhang authored Nov 08, 2021
  
  View commits for tag v0.1.3 v0.1.3
  
  a24b7131
Nov 08, 2021
- Use cinttype header to fix bioconda build. · 3ba5dd3d
  Haowen Zhang authored Nov 07, 2021
  
  3ba5dd3d
- Made pairs output deterministic and format code. · b1100347
  Haowen Zhang authored Nov 07, 2021
  
  b1100347
Nov 07, 2021
- Update LICENSE · 1aa1af29
  Haowen Zhang authored Nov 07, 2021
  
  1aa1af29
- Use Github actions instead of Travis. · 4bdf8f88
  Haowen Zhang authored Nov 06, 2021
  
  4bdf8f88
- Create ci.yml · cb6849c5
  Haowen Zhang authored Nov 06, 2021
  
  cb6849c5
- Remove unnecessary links and flags. · 9cdfad4b
  Haowen Zhang authored Nov 06, 2021
  
  9cdfad4b
- Fix omp shared variables to avoid clang crash. · b690248d
  Haowen Zhang authored Nov 04, 2021
  
  b690248d
- Fix output format warning for clang. · f7932739
  Haowen Zhang authored Nov 04, 2021
  
  f7932739
Nov 03, 2021
- Update README.md · 87bb25d6
  Haowen Zhang authored Nov 02, 2021
  
  87bb25d6
Oct 31, 2021
- Merge pull request #31 from haowenz/haowenz-update-readme · 73ec0c22
  Li Song authored Oct 30, 2021
  73ec0c22
- Update README.md · 0223f0a1
  Haowen Zhang authored Oct 30, 2021
  
  0223f0a1
Sep 21, 2021
- Update version. · 0b88e6d1
  Haowen Zhang authored Sep 20, 2021
  
  View commits for tag v0.1.2 v0.1.2
  
  0b88e6d1
- Merge pull request #29 from haowenz/fix_trim · 388650db
  Haowen Zhang authored Sep 20, 2021
  388650db
- Update README.md · ab051c3a
  Haowen Zhang authored Sep 20, 2021
  
  ab051c3a
- Update README.md · c35eff20
  Li Song authored Sep 20, 2021
  
  c35eff20
Sep 20, 2021
- Add Chromap website and manpage. · d0116af8
  Haowen Zhang authored Sep 20, 2021
  
  d0116af8
- Set theme jekyll-theme-modernist · 8a6b5f20
  Haowen Zhang authored Sep 19, 2021
  
  8a6b5f20
Sep 19, 2021
- Update README.md · 42034788
  Haowen Zhang authored Sep 19, 2021
  
  42034788
Sep 18, 2021
- Actually trim sequences and quality scores. · 38bf5ef2
  Haowen Zhang authored Sep 18, 2021
  
  38bf5ef2
- Declare specialization in header. · 41f684a7
  Haowen Zhang authored Sep 18, 2021
  
  41f684a7
- Fix --preset parameters. · bfdc5f41
  Haowen Zhang authored Sep 17, 2021
  
  bfdc5f41
Sep 16, 2021
- Update version. · e92dff33
  Haowen Zhang authored Sep 16, 2021
  
  View commits for tag v0.1.1 v0.1.1
  
  e92dff33
- Add man. · 8d5c1356
  Haowen Zhang authored Sep 16, 2021
  
  8d5c1356
Sep 07, 2021
- Update the version. · 8dfd28a6
  Haowen Zhang authored Sep 06, 2021
  
  8dfd28a6
- Merge branch 'refactor' · 567fc3ed
  Haowen Zhang authored Sep 06, 2021
  567fc3ed
- Merge pull request #28 from haowenz/li_dev2 · 860b7044
  Haowen Zhang authored Sep 06, 2021
  860b7044

Admin message

Commits · ff8fb17e20eb2b67cda754c40432f3f0e556c476