Commit 38bf5ef2 authored by Haowen Zhang's avatar Haowen Zhang
Browse files

Actually trim sequences and quality scores.

parent 41f684a7

src/sequence_batch.h

+3 −0
Original line number Diff line number Diff line
@@ -95,6 +95,9 @@ class SequenceBatch { 
        negative_sequence_batch_[sequence_index].begin() + sequence->seq.l -

            length_after_trim);

    sequence->seq.l = length_after_trim;

    sequence->seq.s[sequence->seq.l] = '\0';

    sequence->qual.l = length_after_trim;

    sequence->qual.s[sequence->qual.l] = '\0';

  }

  inline void SwapSequenceBatch(SequenceBatch &batch) {

    sequence_batch_.swap(batch.GetSequenceBatch());

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