Commits · 35e6b14402357dc719529a2dcf80e4906f4a3178 · Chaos / Cutandrun

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May 18, 2022
- added cited tools · 35e6b144
  Chris Cheshire authored May 18, 2022
  
  35e6b144
- Updated test run names · 8eae2998
  Chris Cheshire authored May 18, 2022
  
  8eae2998
- Removed config info · 89ed0261
  Chris Cheshire authored May 18, 2022
  
  89ed0261
- Updated schema input · 04f4bb8f
  Chris Cheshire authored May 18, 2022
  
  04f4bb8f
- Changed all yaml to yml · 3940babb
  Chris Cheshire authored May 18, 2022
  
  3940babb
- Template merge · 8f1f5657
  Chris Cheshire authored May 18, 2022
  
  8f1f5657
May 16, 2022
- Template update for nf-core/tools version 2.4 · 6e3c8f1d
  nf-core-bot authored May 16, 2022
  
  6e3c8f1d
May 09, 2022
- Prettier updates · 3fe7194a
  Chris Cheshire authored May 09, 2022
  
  3fe7194a
- Switched to biocontainer mulled for reporting · b626be2c
  Chris Cheshire authored May 09, 2022
  
  b626be2c
May 06, 2022
- Change log updated · af9e4ca5
  Chris Cheshire authored May 06, 2022
  
  af9e4ca5
- Updated documentation · 9525af91
  Chris Cheshire authored May 06, 2022
  
  9525af91
May 05, 2022
- Updated output · ec2b4679
  Chris Cheshire authored May 05, 2022
  
  ec2b4679
- Updated usage file · cf985d17
  Chris Cheshire authored May 05, 2022
  
  cf985d17
- Spelling fixes · ee128c64
  Chris Cheshire authored May 05, 2022
  
  ee128c64
- Prettier changes · 78efd333
  Chris Cheshire authored May 05, 2022
  
  78efd333
- Prettier changes · 604329e0
  Chris Cheshire authored May 05, 2022
  
  604329e0
- Fixed line endings · 1d0ae219
  Chris Cheshire authored May 05, 2022
  
  1d0ae219
- Updated usage · b843daa5
  Chris Cheshire authored May 05, 2022
  
  b843daa5
May 04, 2022
- Updated demo sample sheet · c609a84c
  Chris Cheshire authored May 04, 2022
  
  c609a84c
- Updated readme · f8ecea75
  Chris Cheshire authored May 04, 2022
  
  f8ecea75
- Module update fixes for pipeline · 5d167018
  Chris Cheshire authored May 04, 2022
  
  5d167018
- bowtie2 now supports large indexes · fb4f3fbd
  Chris Cheshire authored May 03, 2022
  
  fb4f3fbd
May 03, 2022
- Updated modules · e32038ec
  Chris Cheshire authored May 03, 2022
  
  e32038ec
- Updated macs2 · 07aa00c2
  Chris Cheshire authored May 03, 2022
  
  07aa00c2
- Updated schema · a4d4b79b
  Chris Cheshire authored May 03, 2022
  
  a4d4b79b
- Merge branch 'frip-optimisation' into dev · d2a7e995
  Chris Cheshire authored May 03, 2022
  
  d2a7e995
- Fixed frip tests · 76d509e9
  Chris Cheshire authored May 03, 2022
  
  76d509e9
- Fixed whitespace · f01d79c3
  Chris Cheshire authored May 03, 2022
  
  f01d79c3
Apr 26, 2022
- fixed prettier · 33e76ed3
  Chris Cheshire authored Apr 26, 2022
  
  33e76ed3
- added option to skip frip · f99e78a7
  Chris Cheshire authored Apr 26, 2022
  
  f99e78a7
- Fixed consensus peak threshold bug · be0823ec
  Chris Cheshire authored Apr 26, 2022
  
  be0823ec
- Added maxmin for heatmap · 4e95724a
  Chris Cheshire authored Apr 26, 2022
  
  4e95724a
- Switched frip calculation to single thread · 84a6fd86
  Chris Cheshire authored Apr 26, 2022
  
  84a6fd86
- Removed old containers · 7ee75cc7
  Chris Cheshire authored Apr 26, 2022
  
  7ee75cc7
- Merged all custom images into one · 7f213d26
  Chris Cheshire authored Apr 26, 2022
  
  7f213d26
Apr 22, 2022
- Merge branch 'tamara-samplesheet' into dev · 38c399b0
  Chris Cheshire authored Apr 22, 2022
  
  38c399b0
- Split out some peak caller tests · f527a1ad
  Chris Cheshire authored Apr 22, 2022
  
  f527a1ad
- Fixed control selection for peak calling and added more tests · b3988e03
  Chris Cheshire authored Apr 22, 2022
  
  b3988e03
Apr 21, 2022
- Fixed igg control splitting · 812fe226
  Chris Cheshire authored Apr 21, 2022
  
  812fe226
- Mark dups fix for is_control · 9857cd2f
  Chris Cheshire authored Apr 21, 2022
  
  9857cd2f

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Commits · 35e6b14402357dc719529a2dcf80e4906f4a3178