Commit 7ee75cc7 authored by Chris Cheshire's avatar Chris Cheshire
Browse files

Removed old containers

parent 7f213d26

modules/local/modules/calculate_frip/Dockerfile

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FROM nfcore/base:2.1



# Install conda packages

COPY ./environment.yml /

RUN conda env create -f /environment.yml && conda clean -a

ENV PATH /opt/conda/envs/packages/bin:$PATH

modules/local/modules/calculate_frip/environment.yml

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# conda env create -f environment.yml

name: packages

channels:

  - conda-forge

  - bioconda

  - defaults

dependencies:

  # python version

  - python=3.8.3



  # conda packages

  - deeptools=3.5.*

  - pysam=0.17.*

modules/local/modules/calculate_peak_reprod/Dockerfile

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FROM nfcore/base:2.1



# Install conda packages

COPY ./environment.yml /

RUN conda env create -f /environment.yml && conda clean -a

ENV PATH /opt/conda/envs/packages/bin:$PATH

modules/local/modules/calculate_peak_reprod/environment.yml

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# conda env create -f environment.yml

name: packages

channels:

  - conda-forge

  - bioconda

  - defaults

dependencies:

  # python version

  - python=3.8.3



  # conda packages

  - pandas=1.3.3

  - dask=2021.9.1

modules/local/modules/generate_reports/Dockerfile

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FROM nfcore/base:2.1

LABEL authors="chris.cheshire@crick.ac.uk" \

        description="Docker image containing all requirements for development of static reports"



# Install conda packages

COPY ./environment.yml /

RUN conda env create -f /environment.yml && conda clean -a

ENV PATH /opt/conda/envs/reporting/bin:$PATH

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