Commits · 673cc990e281dc7941785e730235648a1f31513e · github_fork / Universc · GitLab

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Jan 31, 2021
- set up test jobs for SCI-Seq v3 · 673cc990
  TomKellyGenetics authored Jan 31, 2021
  
  673cc990
- Merge branch 'master' of github.com:minoda-lab/universc · b2e32a92
  TomKellyGenetics authored Jan 31, 2021
  
  b2e32a92
- update files tracked by git LFS · 01f39477
  TomKellyGenetics authored Jan 31, 2021
  
  01f39477
- configure github actions jobs to succeed on timeout and set up references · 95366340
  TomKellyGenetics authored Jan 31, 2021
  
  95366340
Jan 30, 2021
- update test scripts for github actions · e44705a0
  TomKellyGenetics authored Jan 30, 2021
  
  e44705a0
- update github actions build · 50cebbd3
  TomKellyGenetics authored Jan 30, 2021
  
  50cebbd3
- configure reference data in test jobs for github actions · aa7972f7
  TomKellyGenetics authored Jan 30, 2021
  
  aa7972f7
- configure docker tests on github actions · 1066725a
  TomKellyGenetics authored Jan 30, 2021
  
  1066725a
- configure docker tests on github actions · 44482cca
  TomKellyGenetics authored Jan 30, 2021
  
  44482cca
Jan 28, 2021
- update configuration for github actions tests · 9032178f
  TomKellyGenetics authored Jan 29, 2021
  
  9032178f
- Merge branch 'master' of github.com:minoda-lab/universc · 1b0fc528
  TomKellyGenetics authored Jan 29, 2021
  
  1b0fc528
- restore dropseq test data · 939c949c
  TomKellyGenetics authored Jan 28, 2021
  
  939c949c
- correct test jobs with GitHub Actions · 59a374d9
  TomKellyGenetics authored Jan 28, 2021
  
  59a374d9
- reorganise tests on GitHub Actions · 09f88941
  TomKellyGenetics authored Jan 28, 2021
  
  09f88941
- Merge branch 'master' of https://github.com/minoda-lab/universc · c12066f0
  TomKellyGenetics authored Jan 28, 2021
  
  c12066f0
- remove test data in github actions for disk space · a6edf740
  TomKellyGenetics authored Jan 28, 2021
  
  a6edf740
- add test data for indrops-v3 · fa6f47a0
  TomKellyGenetics authored Jan 28, 2021
  
  fa6f47a0
Jan 27, 2021
- Merge branch 'master' of github.com:minoda-lab/universc · 28840b30
  TomKellyGenetics authored Jan 27, 2021
  
  28840b30
- test job for inDrops v3 · dd18d1a2
  TomKellyGenetics authored Jan 27, 2021
  
  dd18d1a2
- test job for inDrops v3 · 82c785b8
  TomKellyGenetics authored Jan 27, 2021
  
  82c785b8
- test job for Smart-Seq3 · 72311b9f
  TomKellyGenetics authored Jan 27, 2021
  
  72311b9f
- test job for Smart-Seq3 · 66c101df
  TomKellyGenetics authored Jan 27, 2021
  
  66c101df
- add test data for smartseq3 · 657912ee
  TomKellyGenetics authored Jan 27, 2021
  
  657912ee
- rename files for DropSeq tests · 64c0182f
  TomKellyGenetics authored Jan 27, 2021
  
  64c0182f
- separate test jobs for 10x versions · 83627f27
  TomKellyGenetics authored Jan 27, 2021
  
  83627f27
- separate test job for 10x v2 chemistry · d6fb4de3
  TomKellyGenetics authored Jan 27, 2021
  
  d6fb4de3
- separate test job for 10x v2 chemistry · a88b271d
  TomKellyGenetics authored Jan 27, 2021
  
  a88b271d
- support Sci-Seq-3 with dedicated subroutine for dual indexes · e8a2e8d8
  TomKellyGenetics authored Jan 27, 2021
  
  e8a2e8d8
- correct syntax for indrops parameters · 78c03832
  TomKellyGenetics authored Jan 27, 2021
  
  78c03832
- add sciseq barcodes · 0543786a
  TomKellyGenetics authored Jan 27, 2021
  
  0543786a
- support inDrops-v3 with dedicated subroutine · 186d5c7d
  TomKellyGenetics authored Jan 27, 2021
  
  186d5c7d
- support Smart-Seq3 with dedicated subroutine · eb77c3ad
  TomKellyGenetics authored Jan 27, 2021
  
  eb77c3ad
- support Smart-Seq3 UMI reads with dual indexes · b920a666
  TomKellyGenetics authored Jan 27, 2021
  
  b920a666
- rename SmartSeq3 script · 1f7eb28b
  TomKellyGenetics authored Jan 27, 2021
  
  1f7eb28b
- script for concentenating Smart-Seq3 FASTQ files · d89d3c10
  kai.b authored Jan 27, 2021
  
  d89d3c10
- debugging Smart-Seq3 · 2dcbb183
  TomKellyGenetics authored Jan 27, 2021
  
  2dcbb183
- update style in script for SmartSeq-3 · 4ce22e6d
  kai.b authored Jan 27, 2021
  
  4ce22e6d
- use custom perl script for SmartSeq-3 filtering (remove BBMap and fastq_pair dependencies) · 4bc44144
  TomKellyGenetics authored Jan 27, 2021
  
  4bc44144
- benchmarking SmartSeq perl script · 5cb96179
  TomKellyGenetics authored Jan 27, 2021
  
  5cb96179
- benchmarking SmartSeq subroutines · ffa520a5
  TomKellyGenetics authored Jan 27, 2021
  
  ffa520a5

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