Commits · b9de5fcdad1a79af9909d23edfecbc81ecc9672f · github_fork / Chromap

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Dec 24, 2021
- Add the strand field in the --read-format option. · b9de5fcd
  Li authored Dec 23, 2021
  
  b9de5fcd
Dec 21, 2021
- Update the man page and the version. · d0c57d40
  Haowen Zhang authored Dec 20, 2021
  
  View commits for tag v0.1.4 v0.1.4
  
  d0c57d40
- Remove header dependency for now. · 0f3b6bd2
  Haowen Zhang authored Dec 20, 2021
  
  0f3b6bd2
- Forgot to include a header. · da7e32e4
  Li authored Dec 20, 2021
  
  da7e32e4
- Format code and change class variable names. · 480a054a
  Haowen Zhang authored Dec 20, 2021
  
  480a054a
- Update README.md · 21b8b9bb
  Haowen Zhang authored Dec 20, 2021
  
  21b8b9bb
- Removed a comment line. · 1a380966
  Haowen Zhang authored Dec 20, 2021
  
  1a380966
- Update README. Code refactoring. · 92372b20
  Li authored Dec 20, 2021
  
  92372b20
- Code refactoring · d26c0d4c
  Li authored Dec 20, 2021
  
  d26c0d4c
- Use another way to handle string in khash. Fix a small issue of initialization in mmcache · c1f625c9
  Li authored Dec 18, 2021
  
  c1f625c9
- Fix several issues in the output format of single-end data. · c10a4c30
  Li authored Dec 13, 2021
  
  c10a4c30
- Fix a bug with the bit operation · 9ca20e7e
  Li authored Dec 12, 2021
  
  9ca20e7e
- Preliminary implementation of barcode translation. · 851d1a25
  Li authored Dec 12, 2021
  
  851d1a25
Dec 17, 2021
- Update LICENSE · 847cdd7c
  Li Song authored Dec 16, 2021
  
  847cdd7c
- Update LICENSE · efda8162
  Li Song authored Dec 16, 2021
  
  efda8162
- Update LICENSE · cbcdef88
  Haowen Zhang authored Dec 16, 2021
  
  cbcdef88
Dec 09, 2021
- Only warn the users when whitelist is NA. · ff8fb17e
  Haowen Zhang authored Dec 08, 2021
  
  ff8fb17e
Dec 08, 2021
- Make num_reference_sequences unconst and shared in omp to compile. · 114d6754
  Haowen Zhang authored Dec 02, 2021
  
  114d6754
- Reduce the number of function parameters. · 935d24df
  Haowen Zhang authored Dec 02, 2021
  935d24df
- More refactors. · 8f6e6b3a
  Haowen Zhang authored Dec 01, 2021
  8f6e6b3a
- First step towards this monster. · 6e81245c
  Haowen Zhang authored Nov 28, 2021
  6e81245c
- Move temp mapping file handle to a separate header. · 5ceb935b
  Haowen Zhang authored Nov 28, 2021
  
  5ceb935b
- Put different format classes into separate files. · df421278
  Haowen Zhang authored Nov 28, 2021
  
  df421278
Nov 29, 2021
- Support asan=1 for make · 6770b8aa
  Heng Li authored Nov 28, 2021
  
  6770b8aa
Nov 26, 2021
- Format code. · c5c4994b
  Haowen Zhang authored Nov 25, 2021
  
  c5c4994b
Nov 18, 2021
- Format tab to spaces · 4fc3f1ac
  Li authored Nov 17, 2021
  
  4fc3f1ac
- Check whether the barcode whitelist matches the data and add the option to check this step. · eeee74c4
  Li authored Nov 17, 2021
  
  eeee74c4
- Change the omp statement order with cache update. · 9a2e3f17
  Li authored Nov 17, 2021
  
  9a2e3f17
Nov 10, 2021
- Update README.md · a2eae852
  Haowen Zhang authored Nov 09, 2021
  
  a2eae852
Nov 09, 2021
- Update version. · a24b7131
  Haowen Zhang authored Nov 08, 2021
  
  View commits for tag v0.1.3 v0.1.3
  
  a24b7131
Nov 08, 2021
- Use cinttype header to fix bioconda build. · 3ba5dd3d
  Haowen Zhang authored Nov 07, 2021
  
  3ba5dd3d
- Made pairs output deterministic and format code. · b1100347
  Haowen Zhang authored Nov 07, 2021
  
  b1100347
Nov 07, 2021
- Update LICENSE · 1aa1af29
  Haowen Zhang authored Nov 07, 2021
  
  1aa1af29
- Use Github actions instead of Travis. · 4bdf8f88
  Haowen Zhang authored Nov 06, 2021
  
  4bdf8f88
- Create ci.yml · cb6849c5
  Haowen Zhang authored Nov 06, 2021
  
  cb6849c5
- Remove unnecessary links and flags. · 9cdfad4b
  Haowen Zhang authored Nov 06, 2021
  
  9cdfad4b
- Fix omp shared variables to avoid clang crash. · b690248d
  Haowen Zhang authored Nov 04, 2021
  
  b690248d
- Fix output format warning for clang. · f7932739
  Haowen Zhang authored Nov 04, 2021
  
  f7932739
Nov 03, 2021
- Update README.md · 87bb25d6
  Haowen Zhang authored Nov 02, 2021
  
  87bb25d6
Oct 31, 2021
- Merge pull request #31 from haowenz/haowenz-update-readme · 73ec0c22
  Li Song authored Oct 30, 2021
  73ec0c22

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Commits · b9de5fcdad1a79af9909d23edfecbc81ecc9672f