Commits · 27f7037bb4f11ad82536acf32d9c962925cfcd13 · github_fork / ZUMIs

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Apr 01, 2019
- rerun example data · 27f7037b
  Christoph authored Apr 01, 2019
  
  27f7037b
Mar 31, 2019
- fixed a small bug in cellBarcode_expect · be4cd944
  Swati Parekh authored Mar 30, 2019
  
  be4cd944
Mar 30, 2019
- Merge branch 'master' of https://github.com/sdparekh/zUMIs · 5384308f
  hellmann@bio.lmu.de authored Mar 30, 2019
  
  5384308f
- Added combination of automatic and whitelist BC-detection. · bc19bd2b
  hellmann@bio.lmu.de authored Mar 30, 2019
  
  bc19bd2b
- update checkyaml · 21302444
  Swati Parekh authored Mar 30, 2019
  
  21302444
- update checkyaml · aef69e78
  Swati Parekh authored Mar 30, 2019
  
  aef69e78
- double check executables · d25b6593
  Christoph authored Mar 30, 2019
  
  d25b6593
- improve shiny · 979a92f7
  Christoph authored Mar 30, 2019
  
  979a92f7
- small fixes · f32c7dc6
  Christoph authored Mar 30, 2019
  
  f32c7dc6
- Added yaml proof reading · 18bc0f8c
  Swati Parekh authored Mar 29, 2019
  
  18bc0f8c
- remove unnecessary · dc4740b5
  Christoph authored Mar 29, 2019
  
  dc4740b5
- rasterize too many points · 8a2571a2
  Christoph authored Mar 29, 2019
  
  8a2571a2
- added RNA velocity implementation · 2f5e8bfa
  Christoph authored Mar 29, 2019
  
  2f5e8bfa
Mar 29, 2019
- supplement readme · d2da71f9
  Christoph authored Mar 29, 2019
  
  d2da71f9
- improve stats, remove postmap.yaml · 26c451eb
  Christoph authored Mar 29, 2019
  
  26c451eb
Mar 07, 2019
- fix PE downsampling issue · 11d5e8fa
  Christoph authored Mar 06, 2019
  
  11d5e8fa
Mar 06, 2019
- Merge pull request #106 from gokceneraslan/patch-2 · d224d14b
  cziegenhain authored Mar 06, 2019
  d224d14b
- Fix integer overflow issues in countGenes for large inex matrix · 764d3b23
  Gökçen Eraslan authored Mar 06, 2019
  764d3b23
- Merge pull request #103 from gokceneraslan/patch-1 · 2f2539b0
  cziegenhain authored Mar 06, 2019
  2f2539b0
- Better version check for Rsubread · 7a86a810
  Gökçen Eraslan authored Mar 05, 2019
  7a86a810
Feb 16, 2019
- temp deactivate approx. pattern search · 4c890eeb
  Christoph Ziegenhain authored Feb 16, 2019
  
  4c890eeb
Feb 07, 2019
- Update README.md · 45069112
  Swati Parekh authored Feb 07, 2019
  
  45069112
- barcode binning · 1f3bd377
  Christoph Ziegenhain authored Feb 07, 2019
  
  1f3bd377
Feb 04, 2019
- fixed typo in downsampling options · 4789164e
  Swati Parekh authored Feb 04, 2019
  
  4789164e
Jan 31, 2019
- Solved "vector size NA" issue in downsampling · 71a690ed
  Swati Parekh authored Jan 31, 2019
  
  71a690ed
Jan 18, 2019
- Update README.md · 6809871a
  Swati Parekh authored Jan 17, 2019
  
  6809871a
- finding pattern takes one mismatch · 6b5cb073
  Swati Parekh authored Jan 17, 2019
  
  View commits for tag zUMIs2.2.3 zUMIs2.2.3
  
  6b5cb073
Jan 16, 2019
- fixed unique features in saf · 64c45b22
  Swati Parekh authored Jan 16, 2019
  
  64c45b22
Dec 26, 2018
- try fix again' · 58bf6540
  Christoph Ziegenhain authored Dec 25, 2018
  
  58bf6540
Dec 25, 2018
- make UMI collapse more robust · a2b7b3c2
  Christoph Ziegenhain authored Dec 25, 2018
  
  a2b7b3c2
Oct 21, 2018
- corrected typos · 6b9ef190
  Swati Parekh authored Oct 21, 2018
  
  6b9ef190
- corrected some typos · c83e67fc
  Swati Parekh authored Oct 21, 2018
  
  c83e67fc
Oct 15, 2018
- Update README.md · 53d2b8bc
  Swati Parekh authored Oct 15, 2018
  
  53d2b8bc
- initialized isPass · 68b26bf5
  Swati Parekh authored Oct 14, 2018
  
  68b26bf5
- fix readme formatting · 12cf08a6
  Christoph Ziegenhain authored Oct 14, 2018
  
  View commits for tag zUMIs2.2 zUMIs2.2
  
  12cf08a6
- version 2.2.0: frameshift correction and other improvements · c8aaedaf
  Christoph Ziegenhain authored Oct 14, 2018
  
  c8aaedaf
- version 2.2.0: frameshift correction and other improvements · 40752559
  Christoph Ziegenhain authored Oct 14, 2018
  
  40752559
Oct 09, 2018
- Update README.md · 9507171b
  Swati Parekh authored Oct 09, 2018
  
  9507171b
Oct 05, 2018
- improve clean-up of temporary files · edf1951f
  Christoph Ziegenhain authored Oct 05, 2018
  
  edf1951f
- remove bam merging to further speed up filtering · 47173731
  Christoph Ziegenhain authored Oct 04, 2018
  
  47173731

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Commits · 27f7037bb4f11ad82536acf32d9c962925cfcd13