Commits · 18bc0f8ca351f40b8dcc7ef995d382f5e8b2d694 · github_fork / ZUMIs

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Mar 30, 2019
- Added yaml proof reading · 18bc0f8c
  Swati Parekh authored Mar 29, 2019
  
  18bc0f8c
- remove unnecessary · dc4740b5
  Christoph authored Mar 29, 2019
  
  dc4740b5
- rasterize too many points · 8a2571a2
  Christoph authored Mar 29, 2019
  
  8a2571a2
- added RNA velocity implementation · 2f5e8bfa
  Christoph authored Mar 29, 2019
  
  2f5e8bfa
Mar 29, 2019
- supplement readme · d2da71f9
  Christoph authored Mar 29, 2019
  
  d2da71f9
- improve stats, remove postmap.yaml · 26c451eb
  Christoph authored Mar 29, 2019
  
  26c451eb
Mar 07, 2019
- fix PE downsampling issue · 11d5e8fa
  Christoph authored Mar 06, 2019
  
  11d5e8fa
Mar 06, 2019
- Merge pull request #106 from gokceneraslan/patch-2 · d224d14b
  cziegenhain authored Mar 06, 2019
  d224d14b
- Fix integer overflow issues in countGenes for large inex matrix · 764d3b23
  Gökçen Eraslan authored Mar 06, 2019
  764d3b23
- Merge pull request #103 from gokceneraslan/patch-1 · 2f2539b0
  cziegenhain authored Mar 06, 2019
  2f2539b0
- Better version check for Rsubread · 7a86a810
  Gökçen Eraslan authored Mar 05, 2019
  7a86a810
Feb 16, 2019
- temp deactivate approx. pattern search · 4c890eeb
  Christoph Ziegenhain authored Feb 16, 2019
  
  4c890eeb
Feb 07, 2019
- Update README.md · 45069112
  Swati Parekh authored Feb 07, 2019
  
  45069112
- barcode binning · 1f3bd377
  Christoph Ziegenhain authored Feb 07, 2019
  
  1f3bd377
Feb 04, 2019
- fixed typo in downsampling options · 4789164e
  Swati Parekh authored Feb 04, 2019
  
  4789164e
Jan 31, 2019
- Solved "vector size NA" issue in downsampling · 71a690ed
  Swati Parekh authored Jan 31, 2019
  
  71a690ed
Jan 18, 2019
- Update README.md · 6809871a
  Swati Parekh authored Jan 17, 2019
  
  6809871a
- finding pattern takes one mismatch · 6b5cb073
  Swati Parekh authored Jan 17, 2019
  
  View commits for tag zUMIs2.2.3 zUMIs2.2.3
  
  6b5cb073
Jan 16, 2019
- fixed unique features in saf · 64c45b22
  Swati Parekh authored Jan 16, 2019
  
  64c45b22
Dec 26, 2018
- try fix again' · 58bf6540
  Christoph Ziegenhain authored Dec 25, 2018
  
  58bf6540
Dec 25, 2018
- make UMI collapse more robust · a2b7b3c2
  Christoph Ziegenhain authored Dec 25, 2018
  
  a2b7b3c2
Oct 21, 2018
- corrected typos · 6b9ef190
  Swati Parekh authored Oct 21, 2018
  
  6b9ef190
- corrected some typos · c83e67fc
  Swati Parekh authored Oct 21, 2018
  
  c83e67fc
Oct 15, 2018
- Update README.md · 53d2b8bc
  Swati Parekh authored Oct 15, 2018
  
  53d2b8bc
- initialized isPass · 68b26bf5
  Swati Parekh authored Oct 14, 2018
  
  68b26bf5
- fix readme formatting · 12cf08a6
  Christoph Ziegenhain authored Oct 14, 2018
  
  View commits for tag zUMIs2.2 zUMIs2.2
  
  12cf08a6
- version 2.2.0: frameshift correction and other improvements · c8aaedaf
  Christoph Ziegenhain authored Oct 14, 2018
  
  c8aaedaf
- version 2.2.0: frameshift correction and other improvements · 40752559
  Christoph Ziegenhain authored Oct 14, 2018
  
  40752559
Oct 09, 2018
- Update README.md · 9507171b
  Swati Parekh authored Oct 09, 2018
  
  9507171b
Oct 05, 2018
- improve clean-up of temporary files · edf1951f
  Christoph Ziegenhain authored Oct 05, 2018
  
  edf1951f
- remove bam merging to further speed up filtering · 47173731
  Christoph Ziegenhain authored Oct 04, 2018
  
  47173731
Sep 27, 2018
- speed up UMI hamming distance filter · bdbaac07
  Christoph Ziegenhain authored Sep 27, 2018
  
  bdbaac07
Sep 14, 2018
- fix if pattern detection not in read1 · 2619c460
  Christoph Ziegenhain authored Sep 14, 2018
  
  2619c460
Aug 27, 2018
- speed up sorting of bam files after featureCounts · 529d5a09
  Christoph Ziegenhain authored Aug 27, 2018
  
  529d5a09
Aug 22, 2018
- remove debugging verbose · f0425864
  Christoph Ziegenhain authored Aug 22, 2018
  
  f0425864
- fix all types of read IDs · c711a949
  Christoph Ziegenhain authored Aug 22, 2018
  
  c711a949
Aug 21, 2018
- compatibility with variable cDNA length & odd read IDs · 383e1728
  Christoph Ziegenhain authored Aug 21, 2018
  
  383e1728
- compatibility with variable cDNA length & odd read IDs · 53fd4d48
  Christoph Ziegenhain authored Aug 21, 2018
  
  53fd4d48
- Minor bug fixes · 63166ec5
  Christoph Ziegenhain authored Aug 21, 2018
  
  63166ec5
Aug 10, 2018
- update readme again · 6f40c014
  Christoph Ziegenhain authored Aug 09, 2018
  
  6f40c014

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Commits · 18bc0f8ca351f40b8dcc7ef995d382f5e8b2d694