Loading launch_universc.sh +24 −2 Original line number Diff line number Diff line Loading @@ -1213,6 +1213,10 @@ for key in ${keys[@]}; do list=("${read1[@]}") elif [[ $readkey == "R2" ]]; then list=("${read2[@]}") elif [[ $readkey == "R3" ]]; then list=("${read3[@]}") elif [[ $readkey == "R4" ]]; then list=("${read4[@]}") elif [[ $readkey == "I1" ]]; then list=("${index1[@]}") elif [[ $readkey == "I2" ]]; then Loading Loading @@ -1276,6 +1280,10 @@ for key in ${keys[@]}; do read1=("${list[@]}") elif [[ $readkey == "R2" ]]; then read2=("${list[@]}") elif [[ $readkey == "R3" ]]; then read3=("${list[@]}") elif [[ $readkey == "R4" ]]; then read4=("${list[@]}") elif [[ $readkey == "I1" ]]; then index1=("${list[@]}") elif [[ $readkey == "I2" ]]; then Loading @@ -1287,6 +1295,12 @@ if [[ $verbose ]]; then echo " Input files post-curation 2" echo " ${#read1[@]}files - read1s: ${read1[@]}" echo " ${#read2[@]}files - read2s: ${read2[@]}" if [[ ${#read3[@]} -gt 0 ]]; then echo " ${#read3[@]}files - R3s: ${read3[@]}" fi if [[ ${#read4[@]} -gt 0 ]]; then echo " ${#read4[@]}files - R4s: ${read4[@]}" fi if [[ ${#index1[@]} -gt 0 ]]; then echo " ${#index1[@]}files - I1s: ${index1[@]}" fi Loading @@ -1310,6 +1324,10 @@ for key in ${keys[@]}; do list=("${read1[@]}") elif [[ $readkey == "R2" ]]; then list=("${read2[@]}") elif [[ $readkey == "R3" ]]; then list=("${read3[@]}") elif [[ $readkey == "R4" ]]; then list=("${read4[@]}") elif [[ $readkey == "I1" ]]; then list=("${index1[@]}") elif [[ $readkey == "I2" ]]; then Loading Loading @@ -1464,6 +1482,10 @@ for key in ${keys[@]}; do read1=("${list[@]}") elif [[ $readkey == "R2" ]]; then read2=("${list[@]}") elif [[ $readkey == "R3" ]]; then read3=("${list[@]}") elif [[ $readkey == "R4" ]]; then read4=("${list[@]}") elif [[ $readkey == "I1" ]]; then index1=("${list[@]}") elif [[ $readkey == "I2" ]]; then Loading Loading
launch_universc.sh +24 −2 Original line number Diff line number Diff line Loading @@ -1213,6 +1213,10 @@ for key in ${keys[@]}; do list=("${read1[@]}") elif [[ $readkey == "R2" ]]; then list=("${read2[@]}") elif [[ $readkey == "R3" ]]; then list=("${read3[@]}") elif [[ $readkey == "R4" ]]; then list=("${read4[@]}") elif [[ $readkey == "I1" ]]; then list=("${index1[@]}") elif [[ $readkey == "I2" ]]; then Loading Loading @@ -1276,6 +1280,10 @@ for key in ${keys[@]}; do read1=("${list[@]}") elif [[ $readkey == "R2" ]]; then read2=("${list[@]}") elif [[ $readkey == "R3" ]]; then read3=("${list[@]}") elif [[ $readkey == "R4" ]]; then read4=("${list[@]}") elif [[ $readkey == "I1" ]]; then index1=("${list[@]}") elif [[ $readkey == "I2" ]]; then Loading @@ -1287,6 +1295,12 @@ if [[ $verbose ]]; then echo " Input files post-curation 2" echo " ${#read1[@]}files - read1s: ${read1[@]}" echo " ${#read2[@]}files - read2s: ${read2[@]}" if [[ ${#read3[@]} -gt 0 ]]; then echo " ${#read3[@]}files - R3s: ${read3[@]}" fi if [[ ${#read4[@]} -gt 0 ]]; then echo " ${#read4[@]}files - R4s: ${read4[@]}" fi if [[ ${#index1[@]} -gt 0 ]]; then echo " ${#index1[@]}files - I1s: ${index1[@]}" fi Loading @@ -1310,6 +1324,10 @@ for key in ${keys[@]}; do list=("${read1[@]}") elif [[ $readkey == "R2" ]]; then list=("${read2[@]}") elif [[ $readkey == "R3" ]]; then list=("${read3[@]}") elif [[ $readkey == "R4" ]]; then list=("${read4[@]}") elif [[ $readkey == "I1" ]]; then list=("${index1[@]}") elif [[ $readkey == "I2" ]]; then Loading Loading @@ -1464,6 +1482,10 @@ for key in ${keys[@]}; do read1=("${list[@]}") elif [[ $readkey == "R2" ]]; then read2=("${list[@]}") elif [[ $readkey == "R3" ]]; then read3=("${list[@]}") elif [[ $readkey == "R4" ]]; then read4=("${list[@]}") elif [[ $readkey == "I1" ]]; then index1=("${list[@]}") elif [[ $readkey == "I2" ]]; then Loading
