correct set up for version 3 (669b0ec3) · Commits · github_fork / Universc

launch_universc.sh

+8 −2

Original line number	Diff line number	Diff line
		@@ -362,7 +362,10 @@ if [[ $setup == "true" ]]
		gzip 3M-february-2018.txt.backup
		fi
		#combine 10x and Nadia barcodes
		gzip -k -f nadia_barcode.txt
		if [ ! -f nadia_barcode.txt.gz ]
		then
		gzip -k nadia_barcode.txt
		fi
		zcat nadia_barcode.txt 3M-february-2018.txt.backup > 3M-february-2018.txt
		gzip -f 3M-february-2018.txt
		echo "whitelist converted for Nadia compatibility with version 3 kit"
		@@ -407,7 +410,10 @@ if [[ $setup == "true" ]]
		gzip 3M-february-2018.txt.backup
		fi
		#combine 10x and Nadia barcodes
		gzip -k -f iCELL8_barcode.txt
		if [ ! -f iCELL8_barcode.txt.gz ]
		then
		gzip -k iCELL8_barcode.txt
		fi
		zcat iCELL8_barcode.txt 3M-february-2018.txt.backup > 3M-february-2018.txt
		gzip -f 3M-february-2018.txt
		echo "whitelist converted for iCELL8 compatibility with version 3 kit"