Commit 1e8213f2 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

handle files in other directory

parent 2cf666c1
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+2 −2
Original line number Diff line number Diff line
@@ -589,7 +589,7 @@ if [ ! -f $read ]
    then
    echo "  warning: file $read not in current directory"
    echo "   creating link to full path"
    ln -s $path $read
    mv $path $read
    read1[$i]=$read
fi
done
@@ -639,7 +639,7 @@ if [ ! -f $read ]
    then
    echo "  warning: file $read not in current directory"
    echo "   creating link to full path"
    ln -s $path $read
    mv $read $path
    read2[$i]=$read
fi
done