Merge branch 'master' of dgt-gitlab.gsc.riken.jp:tom/cellranger_convert (1317cce3) · Commits · github_fork / Universc

launch_universc.sh

+1 −1

Original line number	Diff line number	Diff line
		@@ -787,7 +787,7 @@ else
		elif [[ "$technology" == "indrop-v1" ]] \|\| [[ "$technology" == "indrop-v2" ]]; then
		# use bustools whitelist for inDrops-v2 with adapters removed https://github.com/BUStools/bustools/issues/4
		barcodefile=${SDIR}/inDrops_barcodes.txt
		elif [[ "$technology" == "indrop-v3" ]];
		elif [[ "$technology" == "indrop-v3" ]]; then
		# inDrops-v3 whitelist is a combination of v2 whitelists https://github.com/indrops/indrops/issues/32
		## version 2 whitelist will be used until dual indexing (i7) is supported for read I2: https://github.com/alexdobin/STAR/issues/825
		barcodefile=${SDIR}/inDrops-v2_barcodes.txt