Loading reprocess_deposited_data.md +3 −4 Original line number Diff line number Diff line Loading @@ -18,12 +18,11 @@ cat SRR19912835_2.fastq | awk '{if(NR%4==1) print "@"$2; else if(NR%4==2) print; The new read looks like:\ zless speciesmix.ATAC.R1.fastq.gz | head -4 @A01389:111:H2Y5KDMXY:1:1101:1127:1000_R1.003,R2.032,R3.081,P1.06 GGGCTACACAGAGAAACCCTGTCTCGAAAAACAAACAAAACAAAACAAAA + @A01389:111:H2Y5KDMXY:1:1101:1127:1000_R1.003,R2.032,R3.081,P1.06\ GGGCTACACAGAGAAACCCTGTCTCGAAAAACAAACAAAACAAAACAAAA\ +\ @A01389:111:H2Y5KDMXY:1:1101:1832:1000_R1.083,R2.003,R3.037,P1.06 3. Move the resulting fastq.gz files into a new directoy (/fakepath/fastqfoler/). 4. Update the rawdir and Project in Share_seqV2_example.sh accordingly:\ Loading Loading
reprocess_deposited_data.md +3 −4 Original line number Diff line number Diff line Loading @@ -18,12 +18,11 @@ cat SRR19912835_2.fastq | awk '{if(NR%4==1) print "@"$2; else if(NR%4==2) print; The new read looks like:\ zless speciesmix.ATAC.R1.fastq.gz | head -4 @A01389:111:H2Y5KDMXY:1:1101:1127:1000_R1.003,R2.032,R3.081,P1.06 GGGCTACACAGAGAAACCCTGTCTCGAAAAACAAACAAAACAAAACAAAA + @A01389:111:H2Y5KDMXY:1:1101:1127:1000_R1.003,R2.032,R3.081,P1.06\ GGGCTACACAGAGAAACCCTGTCTCGAAAAACAAACAAAACAAAACAAAA\ +\ @A01389:111:H2Y5KDMXY:1:1101:1832:1000_R1.083,R2.003,R3.037,P1.06 3. Move the resulting fastq.gz files into a new directoy (/fakepath/fastqfoler/). 4. Update the rawdir and Project in Share_seqV2_example.sh accordingly:\ Loading
