# A tutorial for reprocessing data deposited on GEO
The SHARE-seqV2 alignment pipeline generates a pair of fastqs for each sample. These samples are ready to be submitted to GEO. Once the the fastqs are processed by GEO and they will be converted to SRA file with modified read header. This turorial demonstrates how to download deposited data and run the share-seqV2 pipeline.\
The SHARE-seqV2 alignment pipeline generates a pair of fastqs for each sample. These samples are ready to be submitted to GEO. Once the the fastqs are processed by GEO and they will be converted to SRA file with modified read header. This turorial demonstrates how to download deposited data and run the share-seqV2 pipeline.
We have deposited SHARE-seqV2 data on GEO [https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE207308]\
We have deposited SHARE-seqV2 data on [GEO](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE207308)
