Commit 86fcce4d authored by tekath's avatar tekath
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Version 1.0.0 - updated docs.

parent a76153d3

README.md

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A minimal DTUrtle workflow might look like this:



### setup environment

### Setup environment



``` r

library(DTUrtle)
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#multiple other options available for computational clusters.

```



### import and format data

### Import and format data



``` r

#import gtf Annotation to get transcript to gene mapping

docs/404.html

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      </button>

      <span class="navbar-brand">

        <a class="navbar-link" href="https://tobitekath.github.io/DTUrtle/index.html">DTUrtle</a>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.8.1</span>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.0</span>

      </span>

    </div>

docs/LICENSE-text.html

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      </button>

      <span class="navbar-brand">

        <a class="navbar-link" href="index.html">DTUrtle</a>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.8.1</span>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.0</span>

      </span>

    </div>

docs/articles/Hoffman_human_bulk_analysis.html

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docs/articles/Hoffman_human_bulk_preprocess.html

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      </button>

      <span class="navbar-brand">

        <a class="navbar-link" href="../index.html">DTUrtle</a>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.8.1</span>

        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.0.0</span>

      </span>

    </div>
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      <h1 data-toc-skip>Pre-processing of the Hoffman et al. human bulk RNA-seq data</h1>

                        <h4 class="author">Tobias Tekath</h4>

            

            <h4 class="date">2021-07-09</h4>

            <h4 class="date">2021-09-08</h4>

      

      <small class="dont-index">Source: <a href="https://github.com/TobiTekath/DTUrtle/blob/master/vignettes/Hoffman_human_bulk_preprocess.Rmd"><code>vignettes/Hoffman_human_bulk_preprocess.Rmd</code></a></small>

      <div class="hidden name"><code>Hoffman_human_bulk_preprocess.Rmd</code></div>

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