Commit e56ad5b4 authored by Tamara Hodgetts's avatar Tamara Hodgetts
Browse files

set local modules to process_ultralow

parent ba618132

modules/local/linux/sort.nf

+1 −1
Original line number Diff line number Diff line 
process SORT {

    tag "$meta.id"

    label 'process_medium'

    label 'process_ultralow'



    conda (params.enable_conda ? "conda-forge::gawk=5.1.0" : null)

    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

modules/local/modules/calculate_peak_reprod/main.nf

+1 −1
Original line number Diff line number Diff line 
process CALCULATE_PEAK_REPROD {

    tag "$meta.id"

    label 'process_medium'

    label 'process_ultralow'



    conda (params.enable_conda ? "conda-forge::python=3.8.3 conda-forge::dask=2021.9.1 conda-forge::pandas=1.3.3" : null)

    container "luslab/cutandrun-dev-peakrepo:latest"

modules/local/modules/generate_reports/main.nf

+1 −1
Original line number Diff line number Diff line 
process GENERATE_REPORTS {

    label 'process_medium'

    label 'process_ultralow'



    conda (params.enable_conda ? "conda-forge::python=3.8.3 conda-forge::pandas=1.3.3" : null)

    container "luslab/cutandrun-dev-reporting:latest"

modules/local/multiqc.nf

+1 −1
Original line number Diff line number Diff line 
process MULTIQC {

    label 'process_medium'

    label 'process_ultralow'



    conda (params.enable_conda ? "bioconda::multiqc=1.12" : null)

    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

CRA Git | Maintained and supported by SUSTech CRA and CCSE