Commit ba618132 authored by Tamara Hodgetts's avatar Tamara Hodgetts
Browse files

set local modules to process_min

parent ae242029

modules/local/export_meta.nf

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process EXPORT_META {

    label 'process_low'

    label 'process_min'



    conda (params.enable_conda ? "conda-forge::gawk=5.1.0" : null)

    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

modules/local/linux/awk.nf

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process AWK {

    tag "$meta.id"

    label 'process_low'

    label 'process_min'



    conda (params.enable_conda ? "conda-forge::gawk=5.1.0" : null)

    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

modules/local/linux/awk_script.nf

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process AWK_SCRIPT {

    tag "$meta.id"

    label 'process_low'

    label 'process_min'



    conda (params.enable_conda ? "conda-forge::gawk=5.1.0" : null)

    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

modules/local/linux/cut.nf

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process CUT {

    tag "$meta.id"

    label 'process_low'

    label 'process_min'



    conda (params.enable_conda ? "conda-forge::gawk=5.1.0" : null)

    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

modules/local/modules/plot_consensus_peaks/main.nf

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process PLOT_CONSENSUS_PEAKS {

    label 'process_low'

    label 'process_min'



    conda (params.enable_conda ? "conda-forge::python=3.8.3 conda-forge::numpy=1.20.* conda-forge::pandas=1.2.* conda-forge::upsetplot=0.4.4" : null)

    container "luslab/cutandrun-dev-plot-consensus-peaks:latest"

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