Loading modules/local/get_chrom_sizes.nf +1 −1 Original line number Diff line number Diff line Loading @@ -37,7 +37,7 @@ process GET_CHROM_SIZES { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(echo \$(samtools --version 2>&1) | sed 's/^.*samtools //; s/Using.*\$//') samtools: \$(echo \$(samtools --version 2>&1) | sed 's/^.*samtools //; s/Using.*\$//') END_VERSIONS """ } modules/local/python/generate_reports.nf +1 −1 Original line number Diff line number Diff line Loading @@ -45,7 +45,7 @@ process GENERATE_REPORTS { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ Loading modules/local/python/igv_session.nf +1 −1 Original line number Diff line number Diff line Loading @@ -58,7 +58,7 @@ process IGV_SESSION { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ } Loading modules/local/python/plot_consensus_peaks.nf +1 −1 Original line number Diff line number Diff line Loading @@ -28,7 +28,7 @@ process PLOT_CONSENSUS_PEAKS { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ Loading modules/local/python/samplesheet_check.nf +1 −1 Original line number Diff line number Diff line Loading @@ -30,7 +30,7 @@ process SAMPLESHEET_CHECK { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ } Loading Loading
modules/local/get_chrom_sizes.nf +1 −1 Original line number Diff line number Diff line Loading @@ -37,7 +37,7 @@ process GET_CHROM_SIZES { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(echo \$(samtools --version 2>&1) | sed 's/^.*samtools //; s/Using.*\$//') samtools: \$(echo \$(samtools --version 2>&1) | sed 's/^.*samtools //; s/Using.*\$//') END_VERSIONS """ }
modules/local/python/generate_reports.nf +1 −1 Original line number Diff line number Diff line Loading @@ -45,7 +45,7 @@ process GENERATE_REPORTS { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ Loading
modules/local/python/igv_session.nf +1 −1 Original line number Diff line number Diff line Loading @@ -58,7 +58,7 @@ process IGV_SESSION { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ } Loading
modules/local/python/plot_consensus_peaks.nf +1 −1 Original line number Diff line number Diff line Loading @@ -28,7 +28,7 @@ process PLOT_CONSENSUS_PEAKS { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ Loading
modules/local/python/samplesheet_check.nf +1 −1 Original line number Diff line number Diff line Loading @@ -30,7 +30,7 @@ process SAMPLESHEET_CHECK { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: ${getSoftwareName(task.process)}: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") python: \$(python --version | grep -E -o \"([0-9]{1,}\\.)+[0-9]{1,}\") END_VERSIONS """ } Loading
