Commit 9247c906 authored by Chaos's avatar Chaos
Browse files

code clean

parent 3987ca4a
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+1 −2
Changes for hic_local.sh: 1 added line, 2 removed lines.
Original line number Diff line number Diff line
@@ -2,7 +2,6 @@ source $1

thread_str=$local_threads

ls *.fastq | wc -l
$pigz_cmd ${work_dir}/*.fastq

fastq_suffix=fastq.gz
@@ -28,7 +27,7 @@ do
		stop
	fi

	mv ${work_dir}/${sample}*.${fastq_suffix} ${fastq_dir}
	mv $i ${fastq_dir}

	read1_file=${fastq_dir}/${sample}_read1.${fastq_suffix}
	read2_file=${fastq_dir}/${sample}_read2.${fastq_suffix}