Loading SLURM/scripts/juicer.sh +1 −0 Changes for SLURM/scripts/juicer.sh: 1 added line, 0 removed lines. Original line number Diff line number Diff line Loading @@ -283,6 +283,7 @@ if [ -z "$ligation" ]; then MboI) ligation="GATCGATC";; NcoI) ligation="CCATGCATGG";; MboI+HindIII) ligation="'(GATCGATC|AAGCTAGCTT)'";; Arima) ligation="'(GAATAATC|GAATACTC|GAATAGTC|GAATATTC|GAATGATC|GACTAATC|GACTACTC|GACTAGTC|GACTATTC|GACTGATC|GAGTAATC|GAGTACTC|GAGTAGTC|GAGTATTC|GAGTGATC|GATCAATC|GATCACTC|GATCAGTC|GATCATTC|GATCGATC|GATTAATC|GATTACTC|GATTAGTC|GATTATTC|GATTGATC)'";; none) ligation="XXXX";; *) ligation="XXXX" echo "$site not listed as recognized enzyme. Using $site_file as site file" Loading Loading
SLURM/scripts/juicer.sh +1 −0 Changes for SLURM/scripts/juicer.sh: 1 added line, 0 removed lines. Original line number Diff line number Diff line Loading @@ -283,6 +283,7 @@ if [ -z "$ligation" ]; then MboI) ligation="GATCGATC";; NcoI) ligation="CCATGCATGG";; MboI+HindIII) ligation="'(GATCGATC|AAGCTAGCTT)'";; Arima) ligation="'(GAATAATC|GAATACTC|GAATAGTC|GAATATTC|GAATGATC|GACTAATC|GACTACTC|GACTAGTC|GACTATTC|GACTGATC|GAGTAATC|GAGTACTC|GAGTAGTC|GAGTATTC|GAGTGATC|GATCAATC|GATCACTC|GATCAGTC|GATCATTC|GATCGATC|GATTAATC|GATTACTC|GATTAGTC|GATTATTC|GATTGATC)'";; none) ligation="XXXX";; *) ligation="XXXX" echo "$site not listed as recognized enzyme. Using $site_file as site file" Loading
