kernel: add flag that tells the system is handling timeouts

This limits the execution contexts that will go over the loop in
_unpend_first_thread() to only ISRs of very high priority that are
preempting the system clock timer ISR, and only during the time it is
handling timeouts.

Change-Id: Iaf0500d28a2de5e077c9cf9861a5a70244127d58
Signed-off-by: Benjamin Walsh <benjamin.walsh@windriver.com>