Commits · e74859289375539d79e373ff1394f00b03d5331a · 钟慕尧 / deepchem

Browse files

Jun 22, 2021
- Revert "Specify KeyError exception" · e7485928
  alat-rights authored Jun 22, 2021
  e7485928
- Specify KeyError exception · dba572cb
  alat-rights authored Jun 22, 2021
  
  dba572cb
- make charset non-optional · 5a395429
  alat-rights authored Jun 22, 2021
  
  5a395429
- remove featurizer type hinting · dd1fb5b8
  alat-rights authored Jun 22, 2021
  
  dd1fb5b8
- flake8 · 3b30573b
  alat-rights authored Jun 22, 2021
  
  3b30573b
- flake8 · 3fbb2195
  alat-rights authored Jun 22, 2021
  
  3fbb2195
- yapf one hot · d4b58b4d
  alat-rights authored Jun 22, 2021
  
  d4b58b4d
- yapf · 7cc13d53
  alat-rights authored Jun 22, 2021
  
  7cc13d53
- Remove test print · 85ab57e7
  alat-rights authored Jun 22, 2021
  
  85ab57e7
- Remove test print · f3534902
  alat-rights authored Jun 22, 2021
  
  f3534902
- Edit docstring to allow numpy strings · 046deed1
  alat-rights authored Jun 22, 2021
  
  046deed1
- add comment · 73964c9d
  alat-rights authored Jun 22, 2021
  
  73964c9d
- modify shapes expected by unit test for FASTA loader · 9ae8afcd
  alat-rights authored Jun 22, 2021
  
  9ae8afcd
- remove parenthesis · d03b551d
  alat-rights authored Jun 22, 2021
  
  d03b551d
- numpy -> np · 833a02b6
  alat-rights authored Jun 22, 2021
  
  833a02b6
- Fix missing parenthesis · 54d9e3c3
  alat-rights authored Jun 22, 2021
  
  54d9e3c3
- Modified validation logic for OneHotFeaturizer, modified string check · d009de22
  alat-rights authored Jun 22, 2021
  
  d009de22
- Merge branch 'FASTALoaderNew' of https://github.com/alat-rights/deepchem into FASTALoaderNew · ac5bc079
  alat-rights authored Jun 22, 2021
  
  ac5bc079
- Added ATCGN charset · c3950226
  alat-rights authored Jun 22, 2021
  
  c3950226
- Merge branch 'deepchem:master' into FASTALoaderNew · 4f5cf675
  alat-rights authored Jun 22, 2021
  
  4f5cf675
- Added maxlength · 213ce517
  alat-rights authored Jun 22, 2021
  
  213ce517
- Merge pull request #2559 from peastman/torchmultitask · 595d13b2
  Bharath Ramsundar authored Jun 21, 2021
  595d13b2
Jun 21, 2021
- changed default protein to False ie. assume sequences are RNA. This is to... · 145edd41
  alat-rights authored Jun 21, 2021
  145edd41
- fix documentation error · f61da4a2
  alat-rights authored Jun 21, 2021
  
  f61da4a2
- added nucleic acid and amino acid charsets · ef664025
  alat-rights authored Jun 21, 2021
  
  ef664025
- Fixed error in docstring · 84975280
  Peter Eastman authored Jun 20, 2021
  
  84975280
Jun 20, 2021
- Fixed import error when pytorch is not installed · 186c1689
  Peter Eastman authored Jun 19, 2021
  
  186c1689
Jun 19, 2021
- Converted MultitaskRegressor and MultitaskClassifier to PyTorch · 2e40e58f
  Peter Eastman authored Jun 18, 2021
  
  2e40e58f
Jun 18, 2021
- fix accidental edit · 97c53ef6
  alat-rights authored Jun 18, 2021
  
  97c53ef6
- Remove references to protein · a0e5610d
  alat-rights authored Jun 18, 2021
  
  a0e5610d
- Chop off ' · 6ca510ed
  alat-rights authored Jun 18, 2021
  6ca510ed
- Added docstring · 308a6b37
  alat-rights authored Jun 18, 2021
  
  308a6b37
Jun 17, 2021
- make sequences a local-er var · 1eb26651
  alat-rights authored Jun 17, 2021
  
  1eb26651
- fix bug · 918a4fae
  alat-rights authored Jun 17, 2021
  
  918a4fae
- some internal modifications. trying to make the tests pass · f731e1f1
  alat-rights authored Jun 17, 2021
  
  f731e1f1
- numpy -> np · a5b9c809
  alat-rights authored Jun 17, 2021
  
  a5b9c809
- Fix typo · 85aec8bf
  alat-rights authored Jun 17, 2021
  
  85aec8bf
- Added docstring for auto_add_annotations · f33c1f19
  alat-rights authored Jun 17, 2021
  
  f33c1f19
- Added OneHotFeaturizer default and made edit to return shape · 09c4e526
  alat-rights authored Jun 17, 2021
  
  09c4e526
Jun 16, 2021
- FASTALoader accepting arbitrary featurizers (not tested) · 22feb7df
  alat-rights authored Jun 16, 2021
  
  22feb7df

Admin message

Commits · e74859289375539d79e373ff1394f00b03d5331a