Commit 369b6f23 authored by Bharath Ramsundar's avatar Bharath Ramsundar
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parent 5d34c722
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+42 −1
Original line number Diff line number Diff line
@@ -33,5 +33,46 @@ from deepchem.molnet.load_function.hppb_datasets import load_hppb
from deepchem.molnet.load_function.chembl25_datasets import load_chembl25

from deepchem.molnet.run_benchmark import run_benchmark
#from deepchem.molnet.run_benchmark_low_data import run_benchmark_low_data
from deepchem.molnet import run_benchmark_models

# Deprecation warnings
from deepchem.applications.genomics import simulate_motif_density_localization as motif_density_localization
from deepchem.applications.genomics import simulate_motif_counting as motif_counting
from deepchem.applications.genomics import simple_motif_embedding as motif_embedding
from deepchem.applications.genomics import motif_density as density
from deepchem.applications.genomics import simulate_single_motif_detection as single_motif_detection


def simulate_motif_density_localization(*args, **kwargs):
  warnings.warn(
      "This function has been deprecated and now resides in deepchem.applications.genomics ",
      DeprecationWarning)
  motif_density_localization(*args, **kwargs)


def simulate_motif_counting(*args, **kwargs):
  warnings.warn(
      "This function has been deprecated and now resides in deepchem.applications.genomics ",
      DeprecationWarning)
  motif_counting(*args, **kwargs)


def simple_motif_embedding(*args, **kwargs):
  warnings.warn(
      "This function has been deprecated and now resides in deepchem.applications.genomics ",
      DeprecationWarning)
  motif_embedding(*args, **kwargs)


def motif_density(*args, **kwargs):
  warnings.warn(
      "This function has been deprecated and now resides in deepchem.applications.genomics ",
      DeprecationWarning)
  density(*args, **kwargs)


def simulate_single_motif_detection(*args, **kwargs):
  warnings.warn(
      "This function has been deprecated and now resides in deepchem.applications.genomics ",
      DeprecationWarning)
  single_motif_detection(*args, **kwargs)