"Moved the build file to the project base direcotry, changed the target names"

	- ./run-jacoco /absolute/path/to/repo/triangle triangle /absolute/path/to/repo/tacoco

4. Compile the Tarantula classes (in the tarantula dir)

	- ant compile	

	- ant compile-tarantula	

NOTE: currently the run target is not working, it is unable to find the second argument

5. Run Tarantula's Main: Main requires two args(see the file for more details), the first is the absolute path to the cov-matrix.json file, the second is the name of the Test class, if the test program belongs to a package make sure to specify the package, ex: Triangle.TestSuite. 

	-  ant -Darg0=/abs/path/to/triangle-compact-cov-matrix.json -Darg1=triangle.src.test.java.TestSuite run

	-  ant -Darg0=/abs/path/to/triangle-compact-cov-matrix.json -Darg1=triangle.src.test.java.TestSuite run-tarantula

6. Clean the tacoco dir: Run clean-tacoco in order to clean the dir so it can be reused, this means tacoco will have to be recompiled

	- ./clean-tacoco

		|

		|--- gzoltar:			Scripts that run the gzoltar jar file

		|

		|--- lib:			Additional jars or files used in the repo

		|

		|--- primitive-hamcrest:	Repo, used by tacoco

		|

		|--- tacoco:			Repo, used to obtain per-test line coverage information

<project name="tarantula" default="compile" basedir=".">

<property name="tarantula.src.dir" value="./tarantula/src/tarantula"/>

<property name="tarantula.bin.dir" value ="./tarantula/bin"/>

<!-- Target to clean up -->

    <target name="clean" description="Clean">

        <delete dir="bin"/>

    <target name="clean-tarantula" description="Clean">

        <delete dir="./tarantula/bin"/>

    </target>

<!-- Target to initialize build -->

    <target name="init">

        <mkdir dir="bin"/>

    <target name="init-tarantula">

        <mkdir dir="./tarantula/bin"/>

    </target>

<!-- Target to compile the project -->

    <target name="compile" depends="init" description="Compile">

        <javac includeantruntime="true" srcdir="src" destdir="bin" debug="yes" fork="no">

    <target name="compile-tarantula" depends="init-tarantula" description="Compile">

        <javac includeantruntime="true" srcdir="${tarantula.src.dir}" destdir="${tarantula.bin.dir}" debug="yes" fork="no">

            <classpath>

                <pathelement path="lib/json-simple-1.1.1.jar"/>

                <pathelement path="lib/junit-4.11.jar"/>

                <pathelement path="tarantula/lib/json-simple-1.1.1.jar"/>

                <pathelement path="tarantula/lib/junit-4.11.jar"/>

            </classpath>

        </javac>

    </target>

<!-- Target to run the main-->

    <target name="run" depends="compile">

    <target name="run-tarantula" depends="compile-tarantula">

        <java classname="tarantula.Main">

            <classpath>

               <pathelement path="lib/json-simple-1.1.1.jar"/>