"Added build file to automate compile and run of tarantula, run target is...

	- cd gzoltar

2. Run Gzoltar: the Gzoltar script can be run with the following command

	- ./run-gzoltar ../triangle triangle target/classes/:target/test-classes

	- (Optional) ./run-gzoltar ../triangle triangle target/classes/:target/test-classes | grep "Triangle.java" will print only the suspiciousness for lines in Triangle

	- ./run-gzoltar ../../triangle triangle target/classes/:target/test-classes

	- (Optional) ./run-gzoltar ../../triangle triangle target/classes/:target/test-classes | grep "Triangle.java" will print only the suspiciousness for lines in Triangle

3. Generalize; the general form is 

	- ./run-gzoltar project dir test-package-to-execute class/path

	- cd tacoco/

	- ./run-jacoco /absolute/path/to/repo/triangle triangle /absolute/path/to/repo/tacoco

4. Compile the Tarantula classes, depending on what linux operating system the user is running /lib/ may just be lib/ 

	- (in fault localization research base directory)

		- javac -cp /lib/\\\* tarantula/\*.java

4. Compile the Tarantula classes (in the tarantula dir)

	- ant compile	

5. Run Tarantula's Main: Main requires two args(see the file for more details), the first is the absolute path to the cov-matrix.json file, the second is the name of the Test class, if the test program belongs to a package make sure to specify the package, ex: Triangle.TestSuite. An important note is that the TestSuite.class file must be in the same location as the TestSuite.java file. Otherwise the Main will not find the class file and will throw a NoClassDefFoundError   	

	- copy the .class file to the same dir as the .java file

		- cd triangle/target/../test-classes/../java

		- cp TestSuite.class triangle/src/test/../java 

	- java -cp .:lib/\\\* tarantula.Main /abs/path/to/triangle-compact-cov-matrix.json triangle.src.test.java.TestSuite

NOTE: currently the run target is not working, it is unable to find the second argument

5. Run Tarantula's Main: Main requires two args(see the file for more details), the first is the absolute path to the cov-matrix.json file, the second is the name of the Test class, if the test program belongs to a package make sure to specify the package, ex: Triangle.TestSuite. 

	-  ant -Darg0=/abs/path/to/triangle-compact-cov-matrix.json -Darg1=triangle.src.test.java.TestSuite run

6. Clean the tacoco dir: Run clean-tacoco in order to clean the dir so it can be reused, this means tacoco will have to be recompiled

	- ./clean-tacoco

<!-- Target to compile the project -->

    <target name="compile" depends="init" description="Compile">

        <javac includeantruntime="true"

               srcdir="src"

               destdir="bin"

               debug="yes"

               fork="no">

        <javac includeantruntime="true" srcdir="src" destdir="bin" debug="yes" fork="no">

            <classpath>

                <pathelement path="/lib/json-simple-1.1.1.jar"/>

                <pathelement path="/lib/junit-4.11.jar"/>

                <pathelement path="lib/json-simple-1.1.1.jar"/>

                <pathelement path="lib/junit-4.11.jar"/>

            </classpath>

        </javac>

    </target>

<!-- Target to run the main-->

    <target name="run" depends="compile">

        <java classname="tarantula.Main">

            <classpath>

               <pathelement path="lib/json-simple-1.1.1.jar"/>

               <pathelement path="lib/junit-4.11.jar"/>

               <pathelement location="bin"/>

            </classpath>

            <arg value="${arg0}"/>

            <arg value="${arg1}"/>

        </java>

    </target>

</project>