Commit af3f8ed0 authored by Christoph Ziegenhain's avatar Christoph Ziegenhain
Browse files

reduce unncessary verbose

parent fc65406c

fqfilter_v2.pl

+1 −1
Original line number Diff line number Diff line
@@ -166,7 +166,7 @@ foreach $bc (keys %bclist){ 
}

close BCOUT;



print "Raw reads: $total \nFiltered reads: $filtered \n\n";

#print "Raw reads: $total \nFiltered reads: $filtered \n\n";



#open YAML, '>>', $yml || die "Couldn't open file ".$yml.". Check permissions!\n";

#print YAML "read_layout: ",$lay,"\n";

readYaml4fqfilter.R

+1 −1
Original line number Diff line number Diff line 
#!/usr/bin/env Rscript

require(yaml)

suppressMessages(require(yaml))

y<-commandArgs(trailingOnly = T)



inp<-read_yaml(y)

zUMIs-stats2.R

+2 −2
Original line number Diff line number Diff line
@@ -8,8 +8,8 @@ library(data.table) 
library(yaml)

library(ggplot2)

library(Matrix)

library(dplyr)

library(cowplot)

suppressMessages(library(dplyr))

suppressMessages(library(cowplot))



##########################

myYaml<-commandArgs(trailingOnly = T)

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