Commit 7b89b801 authored by Swati Parekh's avatar Swati Parekh
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Adding zUMIs source and ExampleData

parent 7fc307f8
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                                 Started job on |	Jun 20 08:17:14
                             Started mapping on |	Jun 20 08:34:10
                                    Finished on |	Jun 20 08:35:13
       Mapping speed, Million of reads per hour |	57.14

                          Number of input reads |	999985
                      Average input read length |	50
                                    UNIQUE READS:
                   Uniquely mapped reads number |	612559
                        Uniquely mapped reads % |	61.26%
                          Average mapped length |	49.32
                       Number of splices: Total |	41665
            Number of splices: Annotated (sjdb) |	40984
                       Number of splices: GT/AG |	41012
                       Number of splices: GC/AG |	240
                       Number of splices: AT/AC |	43
               Number of splices: Non-canonical |	370
                      Mismatch rate per base, % |	0.44%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.23
                        Insertion rate per base |	0.01%
                       Insertion average length |	1.25
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	323350
             % of reads mapped to multiple loci |	32.34%
        Number of reads mapped to too many loci |	33
             % of reads mapped to too many loci |	0.00%
                                  UNMAPPED READS:
       % of reads unmapped: too many mismatches |	0.00%
                 % of reads unmapped: too short |	5.75%
                     % of reads unmapped: other |	0.65%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%
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           Time    Speed        Read     Read   Mapped   Mapped   Mapped   Mapped Unmapped Unmapped Unmapped Unmapped
                    M/hr      number   length   unique   length   MMrate    multi   multi+       MM    short    other
Jun 20 08:31:06	Started 1st pass mapping
Jun 20 08:31:18     59.7      199105       50    61.1%     49.3     0.4%    32.4%     0.0%     0.0%     5.8%     0.7%
Jun 20 08:32:03	Finished 1st pass mapping
Jun 20 08:35:13     57.1      999985       50    61.3%     49.3     0.4%    32.3%     0.0%     0.0%     5.8%     0.7%
ALL DONE!
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