Commit 5358e43e authored by sdparekh's avatar sdparekh
Browse files

fix the typing error and add version number

parent fbcc6212
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@@ -27,7 +27,6 @@ use distilReads;
use Approx;

$zumisversion = `cat $zumisdir/zUMIs.sh | grep '^vers=' | cut -f2 -d "="`;
print $zumisversion;
open(YL,"$rscriptexc $zumisdir/readYaml4fqfilter.R $yml |");
@arg=<YL>;
close YL;
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@@ -3,7 +3,7 @@
# Pipeline to run UMI-seq analysis from fastq to read count tables.
# Authors: Swati Parekh, Christoph Ziegenhain, Beate Vieth & Ines Hellmann
# Contact: sparekh@age.mpg.de or christoph.ziegenhain@ki.se
vers=2.9.2
vers=2.9.3
currentv=$(curl -s https://raw.githubusercontent.com/sdparekh/zUMIs/main/zUMIs.sh | grep '^vers=' | cut -f2 -d "=")
if [ "$currentv" != "$vers" ] ; then
    echo -e "------------- \n\n Good news! A newer version of zUMIs is available at https://github.com/sdparekh/zUMIs \n\n-------------";