prevent warning (2bea26cd) · Commits · github_fork / ZUMIs

UMIstuffFUN.R

+2 −2

Original line number	Diff line number	Diff line
		@@ -367,9 +367,9 @@ demultiplex_bam <- function(opt, bamfile, nBCs, samtoolsexc, bccount){
		}

		installed_py <- try(system("pip freeze", intern = TRUE, ignore.stderr = TRUE), silent = TRUE)
		if(grepl('Error', installed_py)){
		suppressWarnings(if(grepl('Error', installed_py)){
		installed_py <- try(system("pip3 freeze", intern = TRUE, ignore.stderr = TRUE), silent = TRUE)
		}
		})

		if(any(grepl("pysam==",installed_py))){
		print("Using python implementation to demultiplex.")