Commits · 0355b9e2a7d67a4e7b38d25231291e86566eea48 · github_fork / Universc · GitLab

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Feb 14, 2022
- update R3 and R4 input · 0355b9e2
  TomKellyGenetics authored Feb 14, 2022
  0355b9e2
- update barcode whitelist for smartseq3 test job · bbfe5099
  TomKellyGenetics authored Feb 14, 2022
  
  bbfe5099
Jan 26, 2022
- update documentation for 1.2.0 · b43454cf
  TomKellyGenetics authored Jan 26, 2022
  
  View commits for tag 1.2.0 1.2.0
  
  b43454cf
- update HEK293T test data for SmartSeq3 · 5245ab97
  TomKellyGenetics authored Jan 26, 2022
  
  5245ab97
- disable 'auto' chemistry for 10x 3` scRNA v1 · 4920e6cd
  TomKellyGenetics authored Jan 26, 2022
  
  4920e6cd
- update keys for running on I1 and R3 for 10x 3` scRNA v1 · 0d5a0310
  TomKellyGenetics authored Jan 26, 2022
  
  0d5a0310
- automated ffile format detection for inDrops v3 and 10x v1 · a6eaad69
  TomKellyGenetics authored Jan 26, 2022
  
  a6eaad69
- update input parameters for 10x v1 · b21a84e8
  TomKellyGenetics authored Jan 26, 2022
  
  b21a84e8
- update documentation for inDrops v3 and 10x v1 · 59a11d9f
  TomKellyGenetics authored Jan 26, 2022
  
  59a11d9f
- update parsing R3 and I1 files for 10x 3` scRNA v1 · e6f5fe3d
  TomKellyGenetics authored Jan 26, 2022
  
  e6f5fe3d
Jan 25, 2022
- switch to using human HEK293T cells · 1ec6981c
  TomKellyGenetics authored Jan 25, 2022
  
  1ec6981c
Nov 20, 2021
- update documentation for running docker · 978e4058
  TomKellyGenetics authored Nov 20, 2021
  
  978e4058
Nov 12, 2021
- update documentation for 1.1.7 · fa292b01
  TomKellyGenetics authored Nov 12, 2021
  
  View commits for tag 1.1.7 1.1.7
  
  fa292b01
- match barcodes for indrops v1 and v2 in combinations · a516609a
  TomKellyGenetics authored Nov 12, 2021
  
  a516609a
- correct indrops v1 and v2 barcodes to use reverse complement sequence · 45b96ac4
  TomKellyGenetics authored Nov 12, 2021
  
  45b96ac4
- remove indrops v1 or v2 linker by matching poly-T · 35be04d3
  TomKellyGenetics authored Nov 12, 2021
  
  35be04d3
- allow mismatches in indrops v1 or v2 linker · 4c3435dd
  TomKellyGenetics authored Nov 12, 2021
  
  4c3435dd
Oct 11, 2021
- update documentation for 1.1.6.2 · 2f13fc5e
  TomKellyGenetics authored Oct 11, 2021
  
  View commits for tag 1.1.6.2 1.1.6.2
  
  2f13fc5e
- add link to references · 6a40895f
  TomKellyGenetics authored Oct 11, 2021
  
  6a40895f
Sep 29, 2021
- update documentation for 1.1.6.1 · d8dc352b
  TomKellyGenetics authored Sep 29, 2021
  
  View commits for tag 1.1.6.1 1.1.6.1
  
  d8dc352b
Sep 26, 2021
- automate pushing updated tags · 2f3ae115
  TomKellyGenetics authored Sep 26, 2021
  
  2f3ae115
- update documentation for 1.1.6 · a24a6561
  TomKellyGenetics authored Sep 26, 2021
  
  View commits for tag 1.1.6 1.1.6
  
  a24a6561
- update metadata and permissons · 02210672
  TomKellyGenetics authored Sep 26, 2021
  
  02210672
- Merge branch 'dev' · 7771854d
  TomKellyGenetics authored Sep 26, 2021
  
  7771854d
- Merge branch 'dev' of github.com:minoda-lab/universc into dev · 19e12489
  TomKellyGenetics authored Sep 26, 2021
  
  19e12489
- Merge branch 'dev' of /home/kai.b/tools/universc · e60c20af
  TomKellyGenetics authored Sep 26, 2021
  
  e60c20af
- correct syntax errors · a75e00fb
  TomKellyGenetics authored Sep 26, 2021
  
  a75e00fb
Sep 22, 2021
- added MakeNewReference.pl to sub · 4957925f
  kai.b authored Sep 22, 2021
  
  4957925f
- minor update · 8c0d1700
  kai.b authored Sep 22, 2021
  
  8c0d1700
Sep 02, 2021
- updaate docker build · a7d7e73a
  TomKellyGenetics authored Sep 02, 2021
  
  a7d7e73a
- update documentation for 1.1.5 · fd52d3c0
  TomKellyGenetics authored Sep 02, 2021
  
  fd52d3c0
- update docs · 197d64a2
  TomKellyGenetics authored Sep 02, 2021
  
  197d64a2
- update for version 1.1.5 release to support GUI · b8bbc069
  TomKellyGenetics authored Sep 02, 2021
  
  View commits for tag 1.1.5 1.1.5
  
  b8bbc069
- add script to generate a custom reference · d15a15d9
  kbattenb authored Sep 02, 2021
  
  d15a15d9
Jul 30, 2021
- correct 10x setup fo chemistry · d44dae84
  TomKellyGenetics authored Jul 30, 2021
  
  View commits for tag 1.1.4 1.1.4
  
  d44dae84
- correct passing auto chemistry to detect 10x v3 · 5ef95054
  TomKellyGenetics authored Jul 30, 2021
  
  5ef95054
- update defaults for 10x auto chemistry and correct v3 detection · d271cba5
  TomKellyGenetics authored Jul 30, 2021
  
  d271cba5
- update handling for 10x barcodes · 4d81f78f
  TomKellyGenetics authored Jul 30, 2021
  
  4d81f78f
- update docker image for compatibility · ec46e057
  TomKellyGenetics authored Jul 30, 2021
  
  ec46e057
- allow running setup on compressed files if translation is missing for 10x · fa68e325
  TomKellyGenetics authored Jul 30, 2021
  
  fa68e325

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