Commit ffc3dc02 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

correct processing icell8 barcodes

parent 40cb330e
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+1 −1
Original line number Diff line number Diff line
@@ -852,7 +852,7 @@ if [[ $setup == "true" ]]; then
            #copy known iCell8 barcodes from convert repo to cellranger install
            rsync -u ${SCRIPT_DIR}/iCell8_barcode.txt ${DIR}-cs/${VERSION}/lib/python/cellranger/barcodes/iCell8_barcode.txt
            #convert barcode whitelist to match converted barcodes
            sed -i 's/^/AAAAA/g' iCell8_barcodes.txt
            sed -i 's/^/AAAAA/g' iCell8_barcode.txt
            echo " imported expected barcodes for iCELL8 ..."
        fi
        echo "Valid barcodes can be calculated accurately for iCELL8"