Loading .gitmodules 0 → 100644 +3 −0 Original line number Diff line number Diff line [submodule "sub/BBMap"] path = sub/BBMap url = https://github.com/BioInfoTools/BBMap.git Dockerfile +5 −0 Original line number Diff line number Diff line Loading @@ -52,3 +52,8 @@ RUN git clone https://github.com/linsalrob/fastq-pair.git \ && cd build \ && gcc -std=gnu99 ../main.c ../robstr.c ../fastq_pair.c ../is_gzipped.c -o fastq_pair \ && cp fastq_pair /bin/fastq_pair RUN wget https://sourceforge.net/projects/bbmap/files/latest/download ; mv download BBMap_38.87.tar.gz \ && tar -xvzf BBMap_38.87.tar.gz ENV PATH bbmap:$PATH Loading
.gitmodules 0 → 100644 +3 −0 Original line number Diff line number Diff line [submodule "sub/BBMap"] path = sub/BBMap url = https://github.com/BioInfoTools/BBMap.git
Dockerfile +5 −0 Original line number Diff line number Diff line Loading @@ -52,3 +52,8 @@ RUN git clone https://github.com/linsalrob/fastq-pair.git \ && cd build \ && gcc -std=gnu99 ../main.c ../robstr.c ../fastq_pair.c ../is_gzipped.c -o fastq_pair \ && cp fastq_pair /bin/fastq_pair RUN wget https://sourceforge.net/projects/bbmap/files/latest/download ; mv download BBMap_38.87.tar.gz \ && tar -xvzf BBMap_38.87.tar.gz ENV PATH bbmap:$PATH
