Commit 9cb9a079 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

correct set up for version 3

parent fc2c9764
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+8 −2
Original line number Diff line number Diff line
@@ -336,9 +336,12 @@ if [[ $setup == "true" ]]
        fi
        #create a file with every possible barcode (permutation)
        if [ -f nadia_barcode.txt.gz ]
            then
            if [ ! -f nadia_barcode.txt ]
                then
                gunzip nadia_barcode.txt.gz
            fi
        fi
        if [ ! -f nadia_barcode.txt ]
            then
            echo AAAA{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G} | sed 's/ /\n/g' > nadia_barcode.txt
@@ -388,9 +391,12 @@ if [[ $setup == "true" ]]
        fi
        #create a file with every possible barcode (permutation)
        if [ -f iCELL8_barcode.txt.gz ]
            then
            if [ ! -f iCELL8_barcode.txt ]
                then
                gunzip iCELL8_barcode.txt.gz
            fi
        fi
        if [ ! -f iCELL8_barcode.txt ]
            then
            echo AAAAA{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G}{A,T,C,G} | sed 's/ /\n/g' > iCELL8_barcode.txt