Commit 903740cd authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

test running call in docker container for GitHub Actions

parent 79a3f626
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+1 −1
Original line number Diff line number Diff line
@@ -2,7 +2,7 @@ name: Docker Compose Actions Workflow
on: push
jobs:
  test:
    runs-on: tomkellygenetics/cellranger_clean:3.0.2.9001
    runs-on: ubuntu-20.04
    steps:
      - uses: actions/checkout@v2
      - name: Build the stack
+1 −1
Original line number Diff line number Diff line
@@ -2,7 +2,7 @@ name: Test 10x Genomics
on: push
jobs:
  test:
    runs-on: tomkellygenetics/cellranger_clean:3.0.2.9001
    runs-on: ubuntu-20.04
    steps:
      - uses: actions/checkout@v2
      - name: Build the stack
+2 −2
Original line number Diff line number Diff line
@@ -2,7 +2,7 @@ name: Docker Test
on: push
jobs:
  test:
    runs-on: tomkellygenetics/cellranger_clean:3.0.2.9001
    runs-on: ubuntu-20.04
    steps:
      - uses: actions/checkout@v2
      - name: Build the stack
@@ -10,4 +10,4 @@ jobs:
      - name: Status
        run: echo "build complete" 
      - name: Call functions
        run: bash test/test_call.sh
        run: docker run -it universc_universc:latest bash /universc/test/test_call.sh
+1 −1
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@@ -2,7 +2,7 @@ name: Test DropSeq / Nadia
on: push
jobs:
  test:
    runs-on: tomkellygenetics/cellranger_clean:3.0.2.9001
    runs-on: ubuntu-20.04
    steps:
      - uses: actions/checkout@v2
      - name: Build the stack
+1 −1
Original line number Diff line number Diff line
@@ -2,7 +2,7 @@ name: Test ICELL8
on: push
jobs:
  test:
    runs-on: tomkellygenetics/cellranger_clean:3.0.2.9001
    runs-on: ubuntu-20.04
    steps:
      - uses: actions/checkout@v2
      - name: Build the stack
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