Commit 8398a0b7 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

correct pairing for trimmed files

parent 86a3871f

sub/TrimSeq4scRNAseq.pl

+1 −1
Original line number Diff line number Diff line
@@ -255,7 +255,7 @@ my $r1_single_file = `basename $r1_raw_file | perl -pe chomp`; 
$r1_single_file = $integrated_folder."/single.".$r1_single_file;



my $temp_r1 = $r1_raw_file.".temp";

my $temp_r2 = $r1_raw_file.".temp";

my $temp_r2 = $r2_raw_file.".temp";

system "$zcat $r1_raw_file > $temp_r1";

system "$zcat $r2_atqt_file > $temp_r2";

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