Commit 739ef6e9 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

correct indexing for multiple files or lanes

parent 8131012b

launch_universc.sh

+2 −2
Original line number Diff line number Diff line
@@ -747,8 +747,8 @@ mkdir -p $crIN 
if [ -d $crIN ]

    then

    for j in ${!read1[@]}

    i=$(($j+1))

    do

    i=$(($j+1))

        read=${read1[$i]}

        if [ -f $crIN/$read ] 

            then
@@ -763,8 +763,8 @@ if [ -d $crIN ] 
        fi

    done

    for j in ${!read2[@]}

    i=$(($j+1))

    do

    i=$(($j+1))

        read=${read2[$i]}

        if [ -f $crIN/$read ]

            then

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