Loading launch_universc.sh +11 −2 Original line number Diff line number Diff line Loading @@ -2455,13 +2455,22 @@ else s/^.{18}//g }' $convFile > ${crIN}/.temp mv ${crIN}/.temp $convFile #remove linker #remove linker (10 bp barcodes) sed -E ' /^(.{10})CAGAGC/ { s/^(.{10})CAGAGC(.{18})/\1\2/g n n s/^(.{26})(.{10})(.{6})(.{18})/\2\4/g s/^(.{10})(.{6})(.{18})/\1\3/g }' $convFile > ${crIN}/.temp mv ${crIN}/.temp $convFile #remove linker (9 bp barcodes) sed -E ' /^(.{9})CAGAGC/ { s/^(.{9})CAGAGC(.{18})/E\1\2/g n n s/^(.{9})(.{6})(.{18})/F\1\3/g }' $convFile > ${crIN}/.temp mv ${crIN}/.temp $convFile #swap barcode and UMI Loading Loading
launch_universc.sh +11 −2 Original line number Diff line number Diff line Loading @@ -2455,13 +2455,22 @@ else s/^.{18}//g }' $convFile > ${crIN}/.temp mv ${crIN}/.temp $convFile #remove linker #remove linker (10 bp barcodes) sed -E ' /^(.{10})CAGAGC/ { s/^(.{10})CAGAGC(.{18})/\1\2/g n n s/^(.{26})(.{10})(.{6})(.{18})/\2\4/g s/^(.{10})(.{6})(.{18})/\1\3/g }' $convFile > ${crIN}/.temp mv ${crIN}/.temp $convFile #remove linker (9 bp barcodes) sed -E ' /^(.{9})CAGAGC/ { s/^(.{9})CAGAGC(.{18})/E\1\2/g n n s/^(.{9})(.{6})(.{18})/F\1\3/g }' $convFile > ${crIN}/.temp mv ${crIN}/.temp $convFile #swap barcode and UMI Loading
