Commit 60936331 authored by Tom Kelly's avatar Tom Kelly
Browse files

Update .gitlab-ci.yml

parent 856a4341
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+1 −1
Original line number Diff line number Diff line
@@ -57,7 +57,7 @@ test2:
  script: convert.sh
    - echo "test file inputs"
    - bash convert.sh -t "icell8" -r "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0" \
    - -- file "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0/tinygex_S1_L001" \
    - -- file "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0/tinygex_S1_L001" 
    - echo "test multiple lanes"
    - bash convert.sh -t "Nadia" -r "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0" \
    - --read1 "~/home/local/lib/cellranger-3.1.0/cellranger-tiny-ref/3.0.0/tinygex_S1_L001_R1_001.fastq.gz" \