revert changes to inDrops (barcodes generated in Perl) (490addd1) · Commits · github_fork / Universc

launch_universc.sh

+2 −2

Original line number	Diff line number	Diff line
		@@ -1173,9 +1173,9 @@ else
		echo " barcode adjusted to ${barcodelength}bp to match the length in the default whitelist for ${technology}"
		fi
		if [[ "$technology" == "indrop-v1" ]] \|\| [[ "$technology" == "indrop-v2" ]]; then
		barcodefile=${whitelistdir}/inDrop_gel_barcode2_list.txt
		barcodefile=${whitelistdir}/inDrop-v2_barcodes.txt
		elif [[ "$technology" == "indrop-v3" ]]; then
		barcodefile=${whitelistdir}/inDrop_gel_barcode2_list.txt
		barcodefile=${whitelistdir}/inDrop-v3_barcodes.txt
		echo "*WARNING: combination of list1 and list2 from indrop-v2 (https://github.com/indrops/indrops/issues/32)**"
		fi
		elif [[ "$technology" == "smartseq" ]]; then