Loading launch_universc.sh +3 −2 Original line number Diff line number Diff line Loading @@ -1811,7 +1811,7 @@ else echo " barcode adjusted to ${barcodelength} bp to match the length in the default whitelist for ${technology}" fi if [[ "$technology" == "indrop-v1" ]] || [[ "$technology" == "indrop-v2" ]]; then barcodefile=${whitelistdir}/inDrop-v2_barcodes.txt barcodefile=${whitelistdir}/inDrop-v1_barcodes.txt elif [[ "$technology" == "indrop-v3" ]]; then barcodefile=${whitelistdir}/inDrop-v3_barcodes.txt echo "***WARNING: combination of list1 and list2 from indrop-v2 (https://github.com/indrops/indrops/issues/32)***" Loading Loading @@ -1914,7 +1914,8 @@ else fi elif [[ "$technology" == "indrop-v"* ]]; then if [[ "$technology" == "indrop-v1" ]] || [[ $technology"" == "indrop-v2" ]]; then perl ${MAKEINDROPBARCODES} ${whitelistdir}/inDrop_gel_barcode1_list.txt ${whitelistdir}/inDrop_gel_barcode2_list.txt v2 ${whitelistdir} sed -E 's/.*(.{8})/\1/g' ${whitelistdir}/inDrop_gel_barcode1_list_revcomp.txt > ${whitelistdir}/inDrop_gel_barcode1_list_revcomp_tail.txt perl ${MAKEINDROPBARCODES} ${whitelistdir}/inDrop_gel_barcode1_list_revcomp_tail.txt ${whitelistdir}/inDrop_gel_barcode2_list_revcomp.txt v1 ${whitelistdir} elif [[ "$technology" == "indrop-v3" ]]; then #allow for barcodes in index (I1) and R1 perl ${MAKEINDROPBARCODES} ${whitelistdir}/inDrop_gel_barcode1_list.txt ${whitelistdir}/inDrop_gel_barcode2_list.txt v3 ${whitelistdir} Loading sub/MakeIndropBarcodes.pl +8 −1 Original line number Diff line number Diff line Loading @@ -33,7 +33,14 @@ my $length = scalar (@list1); my @list12; if ($version =~ m/v2/) { if ($version =~ m/v1/) { for (my $i = 0; $i < $length; $i++) { my $element1 = substr ($list1[$i], 0, 8); my $element12 = $element1.$list2[$i]; push (@list12, $element12); } } elsif ($version =~ m/v2/) { for (my $i = 0; $i < $length; $i++) { my $element1 = substr ($list1[$i], 0, 8); my $element12 = $element1.$list2[$i]; Loading whitelists/inDrop_gel_barcode1_list_revcomp.txt 0 → 100644 +384 −0 Original line number Diff line number Diff line GTTTGTTT ACCGTGTTT GATAGTGTTT TGAGGCGGTTT GATCGTTT ATCACGTTT GATGTAGTTT TGACACAGTTT CTTTCTTT AGCCTCTTT GACGGGCTTT TGAATGACTTT TGCTATTT ACGGAATTT GACATTTGTT TGAGTTCTGTT CCGCTGTT AAAATCGTT GATTGGCGTT TGACTACCGTT GTAACGTT AACTGAGTT GAAGGCAGTT TGACTGTTCTT ACCTTCTT AATACTCTT GAGAAGGCTT TGAAGGAGCTT TCATCCTT AAGCGCCTT GAGGTCCCTT TGACAATACTT TTGGACTT ACCCGACTT GATCTCACTT TGAGACAACTT TCCTTATT AGATGTATT GAGTCATATT TGAGCCGGATT CTTCGATT AGAACGATT GAACGCCATT TGACATACATT ATCTTTGT ACTACTTGT GAAAGATTGT TGACTTGGTGT TTATCTGT ATGGCCTGT GACGAGATGT TGAGTCCATGT GGGTTGGT ACCCTTGGT GATCTGTGGT TGAAAACTGGT GCATGGGT AAATCGGGT GATTGAGGGT TGATCGACGGT CTTCAGGT AGGGAAGGT GAGAATTCGT TGAGTCGTCGT TTAAGCGT ATGCTCCGT GAACTGCCGT TGATAACCCGT CCAACCGT AGTTTACGT GACAATTAGT TGACGGGTAGT GCTCTAGT AGTATGAGT GATTCCGAGT TGACCAGCAGT TGACCAGT AAGCGAAGT GATGGTTTCT TGACACTTTCT AAGCTTCT ATTGATTCT GATGAGGTCT TGACCTCGTCT GTCTCTCT AGCACCTCT GAGCGTTGCT TGATACGTGCT GGCATGCT AAGATGGCT GAACCACGCT TGAGTGGAGCT TCGAAGCT ATGTGTCCT GACGACTCCT TGATATTGCCT TTCGGCCT AAAACGCCT GACAGTCCCT TGATTTACCCT GCTTACCT AATATACCT GAGGGAACCT TGACCATTACT TAACTACT ATTGTGACT GACACGGACT TGAGAAGCACT GTTCAACT ACCGCAACT GATACAAACT TGACCTGTTAT TAGCTTAT AGGGTGTAT GAGAGAGTAT TGAACATCTAT TTGCATAT AACCCATAT GACGATTGAT TGATCCCTGAT GGTGGGAT AATGCGGAT GAACTAGGAT TGAAGCGCGAT GTTACGAT AGCCAAGAT GAGTTGTCAT TGACAAGTCAT ATATGCAT ACTCCGCAT GAGAGCCCAT TGACAGACCAT CGGCACAT AAAGGTAAT GACGAATAAT TGACTCAGAAT ACTTCAAT AGGGCCAAT GAATGGAAAT TGACAACAAAT AATGTTTG ACTGCGTTG GAATTCCTTG TGAAACCCTTG GTACCTTG ACTAGATTG GAGAGAATTG TGAAGGTTGTG TACTTGTG AGGTTAGTG GAATCAAGTG TGACGAGTCTG CCCATCTG AGCAACCTG GATTAAACTG TGATCGTCATG GCAGCATG AAATGAATG GACCCGAATG TGATAGAAATG AGAGGTGG ACAACGTGG GACTGTCTGG TGATTCGCTGG TCATATGG AGTGGATGG GAGACGATGG TGAATGCATGG CTTACGGG AAGAACGGG GACAAGAGGG TGAAAACAGGG TGCAAGGG AAAAGTCGG GAGATCTCGG TGACGTATCGG ATTTCCGG AAGCTACGG GATAAGACGG TGAAGCGTAGG TAAATAGG ATCATGAGG GATGTAAAGG TGAGACAAAGG GAGTTTCG ATCGGTTCG GACTTCTTCG TGAAAATGTCG TAGCCTCG ATTGGATCG GATGCCATCG TGATTAGTCCG TACAGCCG AACTCACCG GATCGGTACG TGAATTCGACG GTTGCACG AATCCCACG GATGTACACG TGAAACACACG AGGCAACG AACGAAACG GAGGCGTTAG TGATCCCGTAG TAGTCTAG ACGTGCTAG GACCTACTAG TGATGTTTGAG GATGTGAG ATTTGGGAG GATGGAGGAG TGATCACCGAG CTATAGAG AACGCAGAG GACCCTTCAG TGAACGCTCAG CATCGCAG ATCTAGCAG GATGTTCCAG TGAATACCCAG TGCGACAG AGGTCACAG GATTTAACAG TGACACAACAG GGAAACAG AGGCCTAAG GAACACTAAG TGACGTAGAAG GGATAAAG AAGTGAAAG GAGTCCAAAG TGATGTCTTTC CGTATTTC AATATCTTC GATGGGATTC TGAGCGCATTC TTTGTGTC ACAGGTGTC GACGCTAGTC TGAGGTTTCTC TTCCGCTC ACACTCCTC GATGACCCTC TGAGTACACTC TGCGTATC ATCTGCATC GATAACCATC TGAGCCACATC CTTTAATC AAAGTAATC GATCCCAATC TGAGGGAAATC CAGTTTGC ACTGAGTGC GAAGTGATGC TGACTCGATGC GCTTTGGC AATGTTGGC GATACCAGGC TGACACAAGGC ATCAGCGC AGTTACCGC GAGAATACGC TGATTGCACGC AACTTAGC AACGGTAGC GACCCATAGC TGACTACGAGC GGAGAAGC ATTCGTTCC GAGGACTTCC TGATCCAGTCC AGAAGTCC AAAACCTCC GACTTACTCC TGAAACAATCC ACCTTGCC AGAAGTGCC GAATTGGGCC TGATTGTCGCC TTATAGCC AGCAAAGCC GACATCTCCC TGAGTAATCCC TGATGCCC AAATGACCC GACTAGACCC TGAGATTTACC TGGCTACC ATTAGGACC GAGAAAGACC TGATCGACACC GTGTAACC ACCCTAACC GATCTCAACC TGATTGTTTAC CGGCTTAC ACAGATTAC GAAAGCGTAC TGAGTCCGTAC ACGTATAC AGTCAATAC GACTCTTGAC TGAGGTCTGAC AACCTGAC ATAGTGGAC GATGACGGAC TGAGCAAGGAC GATTAGAC ATTCCAGAC GAAGGAAGAC TGAGAGTTCAC TGCCTCAC ATTTATCAC GAATGGGCAC TGACTTCGCAC AGCACCAC AGGTGACAC GACCTGACAC TGACTAGTAAC AGCAGAAC ACGGACAAC GATCGGTTTA TGAAGAAGTTA GGCCCTTA AATGGATTA GACCACATTA TGAGCAGGGTA GAGCGGTA ACTTAGGTA GAGGGAGGTA TGACTCGCGTA CGAACGTA AATTCAGTA GATTGATCTA TGATGTGGCTA ATCCGCTA AAAAGCCTA GACGTACCTA TGAGGCTACTA AGAGACTA ACGTGGATA GAGACAGATA TGATTCACATA CGCTAATA ACCATTTGA GACGCCTTGA TGAGAGGCTGA TGGTATGA AAGCTATGA GATGAAATGA TGACTTCTGGA TCCAGGGA AGTGTCGGA GAACAGCGGA TGAATATAGGA GCAGTCGA AAAACTCGA GAGATTGCGA TGAATGACCGA ACCCACGA AGGGAACGA GAAGTTTAGA TGAGGAATAGA AAATCAGA AGTCAAAGA GACCTATTCA TGAAGGATTCA CGACGTCA ACGCTCTCA GATGTGCTCA TGACTGGTGCA TACCGGCA ATAGTCGCA GACGTCAGCA TGAATGAAGCA CCCAAGCA AGCTTTCCA GATCCGTCCA TGAACTAGCCA AATTCCCA AAGACACCA GAGTTAACCA TGATGATAACA whitelists/inDrop_gel_barcode2_list_revcomp.txt 0 → 100644 +384 −0 Original line number Diff line number Diff line GTTTGTTT CCGTGTTT TAGTGTTT GGCGGTTT GATCGTTT TCACGTTT TGTAGTTT CACAGTTT CTTTCTTT GCCTCTTT CGGGCTTT ATGACTTT TGCTATTT CGGAATTT CATTTGTT GTTCTGTT CCGCTGTT AAATCGTT TTGGCGTT CTACCGTT GTAACGTT ACTGAGTT AGGCAGTT CTGTTCTT ACCTTCTT ATACTCTT GAAGGCTT AGGAGCTT TCATCCTT AGCGCCTT GGTCCCTT CAATACTT TTGGACTT CCCGACTT TCTCACTT GACAACTT TCCTTATT GATGTATT GTCATATT GCCGGATT CTTCGATT GAACGATT ACGCCATT CATACATT ATCTTTGT CTACTTGT AAGATTGT CTTGGTGT TTATCTGT TGGCCTGT CGAGATGT GTCCATGT GGGTTGGT CCCTTGGT TCTGTGGT AAACTGGT GCATGGGT AATCGGGT TTGAGGGT TCGACGGT CTTCAGGT GGGAAGGT GAATTCGT GTCGTCGT TTAAGCGT TGCTCCGT ACTGCCGT TAACCCGT CCAACCGT GTTTACGT CAATTAGT CGGGTAGT GCTCTAGT GTATGAGT TTCCGAGT CCAGCAGT TGACCAGT AGCGAAGT TGGTTTCT CACTTTCT AAGCTTCT TTGATTCT TGAGGTCT CCTCGTCT GTCTCTCT GCACCTCT GCGTTGCT TACGTGCT GGCATGCT AGATGGCT ACCACGCT GTGGAGCT TCGAAGCT TGTGTCCT CGACTCCT TATTGCCT TTCGGCCT AAACGCCT CAGTCCCT TTTACCCT GCTTACCT ATATACCT GGGAACCT CCATTACT TAACTACT TTGTGACT CACGGACT GAAGCACT GTTCAACT CCGCAACT TACAAACT CCTGTTAT TAGCTTAT GGGTGTAT GAGAGTAT ACATCTAT TTGCATAT ACCCATAT CGATTGAT TCCCTGAT GGTGGGAT ATGCGGAT ACTAGGAT AGCGCGAT GTTACGAT GCCAAGAT GTTGTCAT CAAGTCAT ATATGCAT CTCCGCAT GAGCCCAT CAGACCAT CGGCACAT AAGGTAAT CGAATAAT CTCAGAAT ACTTCAAT GGGCCAAT ATGGAAAT CAACAAAT AATGTTTG CTGCGTTG ATTCCTTG AACCCTTG GTACCTTG CTAGATTG GAGAATTG AGGTTGTG TACTTGTG GGTTAGTG ATCAAGTG CGAGTCTG CCCATCTG GCAACCTG TTAAACTG TCGTCATG GCAGCATG AATGAATG CCCGAATG TAGAAATG AGAGGTGG CAACGTGG CTGTCTGG TTCGCTGG TCATATGG GTGGATGG GACGATGG ATGCATGG CTTACGGG AGAACGGG CAAGAGGG AAACAGGG TGCAAGGG AAAGTCGG GATCTCGG CGTATCGG ATTTCCGG AGCTACGG TAAGACGG AGCGTAGG TAAATAGG TCATGAGG TGTAAAGG GACAAAGG GAGTTTCG TCGGTTCG CTTCTTCG AAATGTCG TAGCCTCG TTGGATCG TGCCATCG TTAGTCCG TACAGCCG ACTCACCG TCGGTACG ATTCGACG GTTGCACG ATCCCACG TGTACACG AACACACG AGGCAACG ACGAAACG GGCGTTAG TCCCGTAG TAGTCTAG CGTGCTAG CCTACTAG TGTTTGAG GATGTGAG TTTGGGAG TGGAGGAG TCACCGAG CTATAGAG ACGCAGAG CCCTTCAG ACGCTCAG CATCGCAG TCTAGCAG TGTTCCAG ATACCCAG TGCGACAG GGTCACAG TTTAACAG CACAACAG GGAAACAG GGCCTAAG ACACTAAG CGTAGAAG GGATAAAG AGTGAAAG GTCCAAAG TGTCTTTC CGTATTTC ATATCTTC TGGGATTC GCGCATTC TTTGTGTC CAGGTGTC CGCTAGTC GGTTTCTC TTCCGCTC CACTCCTC TGACCCTC GTACACTC TGCGTATC TCTGCATC TAACCATC GCCACATC CTTTAATC AAGTAATC TCCCAATC GGGAAATC CAGTTTGC CTGAGTGC AGTGATGC CTCGATGC GCTTTGGC ATGTTGGC TACCAGGC CACAAGGC ATCAGCGC GTTACCGC GAATACGC TTGCACGC AACTTAGC ACGGTAGC CCCATAGC CTACGAGC GGAGAAGC TTCGTTCC GGACTTCC TCCAGTCC AGAAGTCC AAACCTCC CTTACTCC AACAATCC ACCTTGCC GAAGTGCC ATTGGGCC TTGTCGCC TTATAGCC GCAAAGCC CATCTCCC GTAATCCC TGATGCCC AATGACCC CTAGACCC GATTTACC TGGCTACC TTAGGACC GAAAGACC TCGACACC GTGTAACC CCCTAACC TCTCAACC TTGTTTAC CGGCTTAC CAGATTAC AAGCGTAC GTCCGTAC ACGTATAC GTCAATAC CTCTTGAC GGTCTGAC AACCTGAC TAGTGGAC TGACGGAC GCAAGGAC GATTAGAC TTCCAGAC AGGAAGAC GAGTTCAC TGCCTCAC TTTATCAC ATGGGCAC CTTCGCAC AGCACCAC GGTGACAC CCTGACAC CTAGTAAC AGCAGAAC CGGACAAC TCGGTTTA AGAAGTTA GGCCCTTA ATGGATTA CCACATTA GCAGGGTA GAGCGGTA CTTAGGTA GGGAGGTA CTCGCGTA CGAACGTA ATTCAGTA TTGATCTA TGTGGCTA ATCCGCTA AAAGCCTA CGTACCTA GGCTACTA AGAGACTA CGTGGATA GACAGATA TTCACATA CGCTAATA CCATTTGA CGCCTTGA GAGGCTGA TGGTATGA AGCTATGA TGAAATGA CTTCTGGA TCCAGGGA GTGTCGGA ACAGCGGA ATATAGGA GCAGTCGA AAACTCGA GATTGCGA ATGACCGA ACCCACGA GGGAACGA AGTTTAGA GGAATAGA AAATCAGA GTCAAAGA CCTATTCA AGGATTCA CGACGTCA CGCTCTCA TGTGCTCA CTGGTGCA TACCGGCA TAGTCGCA CGTCAGCA ATGAAGCA CCCAAGCA GCTTTCCA TCCGTCCA ACTAGCCA AATTCCCA AGACACCA GTTAACCA TGATAACA Loading
launch_universc.sh +3 −2 Original line number Diff line number Diff line Loading @@ -1811,7 +1811,7 @@ else echo " barcode adjusted to ${barcodelength} bp to match the length in the default whitelist for ${technology}" fi if [[ "$technology" == "indrop-v1" ]] || [[ "$technology" == "indrop-v2" ]]; then barcodefile=${whitelistdir}/inDrop-v2_barcodes.txt barcodefile=${whitelistdir}/inDrop-v1_barcodes.txt elif [[ "$technology" == "indrop-v3" ]]; then barcodefile=${whitelistdir}/inDrop-v3_barcodes.txt echo "***WARNING: combination of list1 and list2 from indrop-v2 (https://github.com/indrops/indrops/issues/32)***" Loading Loading @@ -1914,7 +1914,8 @@ else fi elif [[ "$technology" == "indrop-v"* ]]; then if [[ "$technology" == "indrop-v1" ]] || [[ $technology"" == "indrop-v2" ]]; then perl ${MAKEINDROPBARCODES} ${whitelistdir}/inDrop_gel_barcode1_list.txt ${whitelistdir}/inDrop_gel_barcode2_list.txt v2 ${whitelistdir} sed -E 's/.*(.{8})/\1/g' ${whitelistdir}/inDrop_gel_barcode1_list_revcomp.txt > ${whitelistdir}/inDrop_gel_barcode1_list_revcomp_tail.txt perl ${MAKEINDROPBARCODES} ${whitelistdir}/inDrop_gel_barcode1_list_revcomp_tail.txt ${whitelistdir}/inDrop_gel_barcode2_list_revcomp.txt v1 ${whitelistdir} elif [[ "$technology" == "indrop-v3" ]]; then #allow for barcodes in index (I1) and R1 perl ${MAKEINDROPBARCODES} ${whitelistdir}/inDrop_gel_barcode1_list.txt ${whitelistdir}/inDrop_gel_barcode2_list.txt v3 ${whitelistdir} Loading
sub/MakeIndropBarcodes.pl +8 −1 Original line number Diff line number Diff line Loading @@ -33,7 +33,14 @@ my $length = scalar (@list1); my @list12; if ($version =~ m/v2/) { if ($version =~ m/v1/) { for (my $i = 0; $i < $length; $i++) { my $element1 = substr ($list1[$i], 0, 8); my $element12 = $element1.$list2[$i]; push (@list12, $element12); } } elsif ($version =~ m/v2/) { for (my $i = 0; $i < $length; $i++) { my $element1 = substr ($list1[$i], 0, 8); my $element12 = $element1.$list2[$i]; Loading
whitelists/inDrop_gel_barcode1_list_revcomp.txt 0 → 100644 +384 −0 Original line number Diff line number Diff line GTTTGTTT ACCGTGTTT GATAGTGTTT TGAGGCGGTTT GATCGTTT ATCACGTTT GATGTAGTTT TGACACAGTTT CTTTCTTT AGCCTCTTT GACGGGCTTT TGAATGACTTT TGCTATTT ACGGAATTT GACATTTGTT TGAGTTCTGTT CCGCTGTT AAAATCGTT GATTGGCGTT TGACTACCGTT GTAACGTT AACTGAGTT GAAGGCAGTT TGACTGTTCTT ACCTTCTT AATACTCTT GAGAAGGCTT TGAAGGAGCTT TCATCCTT AAGCGCCTT GAGGTCCCTT TGACAATACTT TTGGACTT ACCCGACTT GATCTCACTT TGAGACAACTT TCCTTATT AGATGTATT GAGTCATATT TGAGCCGGATT CTTCGATT AGAACGATT GAACGCCATT TGACATACATT ATCTTTGT ACTACTTGT GAAAGATTGT TGACTTGGTGT TTATCTGT ATGGCCTGT GACGAGATGT TGAGTCCATGT GGGTTGGT ACCCTTGGT GATCTGTGGT TGAAAACTGGT GCATGGGT AAATCGGGT GATTGAGGGT TGATCGACGGT CTTCAGGT AGGGAAGGT GAGAATTCGT TGAGTCGTCGT TTAAGCGT ATGCTCCGT GAACTGCCGT TGATAACCCGT CCAACCGT AGTTTACGT GACAATTAGT TGACGGGTAGT GCTCTAGT AGTATGAGT GATTCCGAGT TGACCAGCAGT TGACCAGT AAGCGAAGT GATGGTTTCT TGACACTTTCT AAGCTTCT ATTGATTCT GATGAGGTCT TGACCTCGTCT GTCTCTCT AGCACCTCT GAGCGTTGCT TGATACGTGCT GGCATGCT AAGATGGCT GAACCACGCT TGAGTGGAGCT TCGAAGCT ATGTGTCCT GACGACTCCT TGATATTGCCT TTCGGCCT AAAACGCCT GACAGTCCCT TGATTTACCCT GCTTACCT AATATACCT GAGGGAACCT TGACCATTACT TAACTACT ATTGTGACT GACACGGACT TGAGAAGCACT GTTCAACT ACCGCAACT GATACAAACT TGACCTGTTAT TAGCTTAT AGGGTGTAT GAGAGAGTAT TGAACATCTAT TTGCATAT AACCCATAT GACGATTGAT TGATCCCTGAT GGTGGGAT AATGCGGAT GAACTAGGAT TGAAGCGCGAT GTTACGAT AGCCAAGAT GAGTTGTCAT TGACAAGTCAT ATATGCAT ACTCCGCAT GAGAGCCCAT TGACAGACCAT CGGCACAT AAAGGTAAT GACGAATAAT TGACTCAGAAT ACTTCAAT AGGGCCAAT GAATGGAAAT TGACAACAAAT AATGTTTG ACTGCGTTG GAATTCCTTG TGAAACCCTTG GTACCTTG ACTAGATTG GAGAGAATTG TGAAGGTTGTG TACTTGTG AGGTTAGTG GAATCAAGTG TGACGAGTCTG CCCATCTG AGCAACCTG GATTAAACTG TGATCGTCATG GCAGCATG AAATGAATG GACCCGAATG TGATAGAAATG AGAGGTGG ACAACGTGG GACTGTCTGG TGATTCGCTGG TCATATGG AGTGGATGG GAGACGATGG TGAATGCATGG CTTACGGG AAGAACGGG GACAAGAGGG TGAAAACAGGG TGCAAGGG AAAAGTCGG GAGATCTCGG TGACGTATCGG ATTTCCGG AAGCTACGG GATAAGACGG TGAAGCGTAGG TAAATAGG ATCATGAGG GATGTAAAGG TGAGACAAAGG GAGTTTCG ATCGGTTCG GACTTCTTCG TGAAAATGTCG TAGCCTCG ATTGGATCG GATGCCATCG TGATTAGTCCG TACAGCCG AACTCACCG GATCGGTACG TGAATTCGACG GTTGCACG AATCCCACG GATGTACACG TGAAACACACG AGGCAACG AACGAAACG GAGGCGTTAG TGATCCCGTAG TAGTCTAG ACGTGCTAG GACCTACTAG TGATGTTTGAG GATGTGAG ATTTGGGAG GATGGAGGAG TGATCACCGAG CTATAGAG AACGCAGAG GACCCTTCAG TGAACGCTCAG CATCGCAG ATCTAGCAG GATGTTCCAG TGAATACCCAG TGCGACAG AGGTCACAG GATTTAACAG TGACACAACAG GGAAACAG AGGCCTAAG GAACACTAAG TGACGTAGAAG GGATAAAG AAGTGAAAG GAGTCCAAAG TGATGTCTTTC CGTATTTC AATATCTTC GATGGGATTC TGAGCGCATTC TTTGTGTC ACAGGTGTC GACGCTAGTC TGAGGTTTCTC TTCCGCTC ACACTCCTC GATGACCCTC TGAGTACACTC TGCGTATC ATCTGCATC GATAACCATC TGAGCCACATC CTTTAATC AAAGTAATC GATCCCAATC TGAGGGAAATC CAGTTTGC ACTGAGTGC GAAGTGATGC TGACTCGATGC GCTTTGGC AATGTTGGC GATACCAGGC TGACACAAGGC ATCAGCGC AGTTACCGC GAGAATACGC TGATTGCACGC AACTTAGC AACGGTAGC GACCCATAGC TGACTACGAGC GGAGAAGC ATTCGTTCC GAGGACTTCC TGATCCAGTCC AGAAGTCC AAAACCTCC GACTTACTCC TGAAACAATCC ACCTTGCC AGAAGTGCC GAATTGGGCC TGATTGTCGCC TTATAGCC AGCAAAGCC GACATCTCCC TGAGTAATCCC TGATGCCC AAATGACCC GACTAGACCC TGAGATTTACC TGGCTACC ATTAGGACC GAGAAAGACC TGATCGACACC GTGTAACC ACCCTAACC GATCTCAACC TGATTGTTTAC CGGCTTAC ACAGATTAC GAAAGCGTAC TGAGTCCGTAC ACGTATAC AGTCAATAC GACTCTTGAC TGAGGTCTGAC AACCTGAC ATAGTGGAC GATGACGGAC TGAGCAAGGAC GATTAGAC ATTCCAGAC GAAGGAAGAC TGAGAGTTCAC TGCCTCAC ATTTATCAC GAATGGGCAC TGACTTCGCAC AGCACCAC AGGTGACAC GACCTGACAC TGACTAGTAAC AGCAGAAC ACGGACAAC GATCGGTTTA TGAAGAAGTTA GGCCCTTA AATGGATTA GACCACATTA TGAGCAGGGTA GAGCGGTA ACTTAGGTA GAGGGAGGTA TGACTCGCGTA CGAACGTA AATTCAGTA GATTGATCTA TGATGTGGCTA ATCCGCTA AAAAGCCTA GACGTACCTA TGAGGCTACTA AGAGACTA ACGTGGATA GAGACAGATA TGATTCACATA CGCTAATA ACCATTTGA GACGCCTTGA TGAGAGGCTGA TGGTATGA AAGCTATGA GATGAAATGA TGACTTCTGGA TCCAGGGA AGTGTCGGA GAACAGCGGA TGAATATAGGA GCAGTCGA AAAACTCGA GAGATTGCGA TGAATGACCGA ACCCACGA AGGGAACGA GAAGTTTAGA TGAGGAATAGA AAATCAGA AGTCAAAGA GACCTATTCA TGAAGGATTCA CGACGTCA ACGCTCTCA GATGTGCTCA TGACTGGTGCA TACCGGCA ATAGTCGCA GACGTCAGCA TGAATGAAGCA CCCAAGCA AGCTTTCCA GATCCGTCCA TGAACTAGCCA AATTCCCA AAGACACCA GAGTTAACCA TGATGATAACA
whitelists/inDrop_gel_barcode2_list_revcomp.txt 0 → 100644 +384 −0 Original line number Diff line number Diff line GTTTGTTT CCGTGTTT TAGTGTTT GGCGGTTT GATCGTTT TCACGTTT TGTAGTTT CACAGTTT CTTTCTTT GCCTCTTT CGGGCTTT ATGACTTT TGCTATTT CGGAATTT CATTTGTT GTTCTGTT CCGCTGTT AAATCGTT TTGGCGTT CTACCGTT GTAACGTT ACTGAGTT AGGCAGTT CTGTTCTT ACCTTCTT ATACTCTT GAAGGCTT AGGAGCTT TCATCCTT AGCGCCTT GGTCCCTT CAATACTT TTGGACTT CCCGACTT TCTCACTT GACAACTT TCCTTATT GATGTATT GTCATATT GCCGGATT CTTCGATT GAACGATT ACGCCATT CATACATT ATCTTTGT CTACTTGT AAGATTGT CTTGGTGT TTATCTGT TGGCCTGT CGAGATGT GTCCATGT GGGTTGGT CCCTTGGT TCTGTGGT AAACTGGT GCATGGGT AATCGGGT TTGAGGGT TCGACGGT CTTCAGGT GGGAAGGT GAATTCGT GTCGTCGT TTAAGCGT TGCTCCGT ACTGCCGT TAACCCGT CCAACCGT GTTTACGT CAATTAGT CGGGTAGT GCTCTAGT GTATGAGT TTCCGAGT CCAGCAGT TGACCAGT AGCGAAGT TGGTTTCT CACTTTCT AAGCTTCT TTGATTCT TGAGGTCT CCTCGTCT GTCTCTCT GCACCTCT GCGTTGCT TACGTGCT GGCATGCT AGATGGCT ACCACGCT GTGGAGCT TCGAAGCT TGTGTCCT CGACTCCT TATTGCCT TTCGGCCT AAACGCCT CAGTCCCT TTTACCCT GCTTACCT ATATACCT GGGAACCT CCATTACT TAACTACT TTGTGACT CACGGACT GAAGCACT GTTCAACT CCGCAACT TACAAACT CCTGTTAT TAGCTTAT GGGTGTAT GAGAGTAT ACATCTAT TTGCATAT ACCCATAT CGATTGAT TCCCTGAT GGTGGGAT ATGCGGAT ACTAGGAT AGCGCGAT GTTACGAT GCCAAGAT GTTGTCAT CAAGTCAT ATATGCAT CTCCGCAT GAGCCCAT CAGACCAT CGGCACAT AAGGTAAT CGAATAAT CTCAGAAT ACTTCAAT GGGCCAAT ATGGAAAT CAACAAAT AATGTTTG CTGCGTTG ATTCCTTG AACCCTTG GTACCTTG CTAGATTG GAGAATTG AGGTTGTG TACTTGTG GGTTAGTG ATCAAGTG CGAGTCTG CCCATCTG GCAACCTG TTAAACTG TCGTCATG GCAGCATG AATGAATG CCCGAATG TAGAAATG AGAGGTGG CAACGTGG CTGTCTGG TTCGCTGG TCATATGG GTGGATGG GACGATGG ATGCATGG CTTACGGG AGAACGGG CAAGAGGG AAACAGGG TGCAAGGG AAAGTCGG GATCTCGG CGTATCGG ATTTCCGG AGCTACGG TAAGACGG AGCGTAGG TAAATAGG TCATGAGG TGTAAAGG GACAAAGG GAGTTTCG TCGGTTCG CTTCTTCG AAATGTCG TAGCCTCG TTGGATCG TGCCATCG TTAGTCCG TACAGCCG ACTCACCG TCGGTACG ATTCGACG GTTGCACG ATCCCACG TGTACACG AACACACG AGGCAACG ACGAAACG GGCGTTAG TCCCGTAG TAGTCTAG CGTGCTAG CCTACTAG TGTTTGAG GATGTGAG TTTGGGAG TGGAGGAG TCACCGAG CTATAGAG ACGCAGAG CCCTTCAG ACGCTCAG CATCGCAG TCTAGCAG TGTTCCAG ATACCCAG TGCGACAG GGTCACAG TTTAACAG CACAACAG GGAAACAG GGCCTAAG ACACTAAG CGTAGAAG GGATAAAG AGTGAAAG GTCCAAAG TGTCTTTC CGTATTTC ATATCTTC TGGGATTC GCGCATTC TTTGTGTC CAGGTGTC CGCTAGTC GGTTTCTC TTCCGCTC CACTCCTC TGACCCTC GTACACTC TGCGTATC TCTGCATC TAACCATC GCCACATC CTTTAATC AAGTAATC TCCCAATC GGGAAATC CAGTTTGC CTGAGTGC AGTGATGC CTCGATGC GCTTTGGC ATGTTGGC TACCAGGC CACAAGGC ATCAGCGC GTTACCGC GAATACGC TTGCACGC AACTTAGC ACGGTAGC CCCATAGC CTACGAGC GGAGAAGC TTCGTTCC GGACTTCC TCCAGTCC AGAAGTCC AAACCTCC CTTACTCC AACAATCC ACCTTGCC GAAGTGCC ATTGGGCC TTGTCGCC TTATAGCC GCAAAGCC CATCTCCC GTAATCCC TGATGCCC AATGACCC CTAGACCC GATTTACC TGGCTACC TTAGGACC GAAAGACC TCGACACC GTGTAACC CCCTAACC TCTCAACC TTGTTTAC CGGCTTAC CAGATTAC AAGCGTAC GTCCGTAC ACGTATAC GTCAATAC CTCTTGAC GGTCTGAC AACCTGAC TAGTGGAC TGACGGAC GCAAGGAC GATTAGAC TTCCAGAC AGGAAGAC GAGTTCAC TGCCTCAC TTTATCAC ATGGGCAC CTTCGCAC AGCACCAC GGTGACAC CCTGACAC CTAGTAAC AGCAGAAC CGGACAAC TCGGTTTA AGAAGTTA GGCCCTTA ATGGATTA CCACATTA GCAGGGTA GAGCGGTA CTTAGGTA GGGAGGTA CTCGCGTA CGAACGTA ATTCAGTA TTGATCTA TGTGGCTA ATCCGCTA AAAGCCTA CGTACCTA GGCTACTA AGAGACTA CGTGGATA GACAGATA TTCACATA CGCTAATA CCATTTGA CGCCTTGA GAGGCTGA TGGTATGA AGCTATGA TGAAATGA CTTCTGGA TCCAGGGA GTGTCGGA ACAGCGGA ATATAGGA GCAGTCGA AAACTCGA GATTGCGA ATGACCGA ACCCACGA GGGAACGA AGTTTAGA GGAATAGA AAATCAGA GTCAAAGA CCTATTCA AGGATTCA CGACGTCA CGCTCTCA TGTGCTCA CTGGTGCA TACCGGCA TAGTCGCA CGTCAGCA ATGAAGCA CCCAAGCA GCTTTCCA TCCGTCCA ACTAGCCA AATTCCCA AGACACCA GTTAACCA TGATAACA
