Commit 1ea56838 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

Merge branch 'master' of dgt-gitlab.gsc.riken.jp:tom/cellranger_convert

parents 2938b032 12408231
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CHANGELOG

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### 0.2.2

allow passing custom barcode whitelists

### 0.2.1

locate script directory

implement lock file to prevent multi technologies running

track last technology ran

### 0.2.0

add support for SGE mode

correct passing description arguments to cellranger

separate whitelist setup for Nadia and iCELL8

configure cellranger version 3 whitelists

add defaults

detect lane and file names

create directory for converted R1sq

### 0.1.0

pass arguments to script

add set up call to configure whitelist when needed

includes a manual and version call

detects input file

converts files if technology other than 10x
 No newline at end of file
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### UniverSC version 0.2.0
### UniverSC version 0.2.2

Conversion script to run Nadia and iCELL8 libraries with cellranger (10x Genomics analysis tool)