Commit 1ad4de51 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

correct script comments

parent 766af5b4
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+4 −2
Original line number Diff line number Diff line
@@ -717,7 +717,7 @@ fi



#####Setting chemisty#####
#####Setting chemistry#####
#check if chemistry matches expected inputs
if [[ $verbose ]]; then
    echo " checking option: --chemistry"
@@ -802,7 +802,7 @@ if [[ $setup == "false" ]]; then
    fi
fi

#check for presence of indexe files
#check for presence of index files
if [[ $verbose ]]; then
    echo " checking option: --index1 and --index2"
fi
@@ -834,6 +834,8 @@ if [[ $setup == "false" ]]; then
    fi   
fi



if [[ $verbose ]]; then
    echo "  ${#read1[@]} read1s: ${read1[@]}"
    echo "  ${#read2[@]} read2s: ${read2[@]}"