Loading launch_universc.sh +5 −5 Original line number Diff line number Diff line Loading @@ -39,13 +39,13 @@ echo "Running launch_universc.sh in '$SCRIPT_DIR'" #####usage statement##### help=' Usage: bash $(basename "$0") -R1=FILE1 -R2=FILE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1=READ1_LANE1 READ1_LANE2 -R2=READ2_LANE1 READ2_LANE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f=SAMPLE_LANE -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f=\"SAMPLE_LANE1 SAMPLE_LANE2\" -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1 FILE1 -R2 FILE2 -t TECHNOLOGY -i ID -r REFERENCE [--option OPT] bash $(basename "$0") -R1 READ1_LANE1 READ1_LANE2 -R2 READ2_LANE1 READ2_LANE2 -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f SAMPLE_LANE -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f \"SAMPLE_LANE1 SAMPLE_LANE2\" -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -v bash $(basename "$0") -h bash $(basename "$0") -t=TECHNOLOGY --setup bash $(basename "$0") -t TECHNOLOGY --setup Convert sequencing data (FASTQ) from various platforms for compatibility with 10x Genomics and run cellranger count Loading Loading
launch_universc.sh +5 −5 Original line number Diff line number Diff line Loading @@ -39,13 +39,13 @@ echo "Running launch_universc.sh in '$SCRIPT_DIR'" #####usage statement##### help=' Usage: bash $(basename "$0") -R1=FILE1 -R2=FILE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1=READ1_LANE1 READ1_LANE2 -R2=READ2_LANE1 READ2_LANE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f=SAMPLE_LANE -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f=\"SAMPLE_LANE1 SAMPLE_LANE2\" -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1 FILE1 -R2 FILE2 -t TECHNOLOGY -i ID -r REFERENCE [--option OPT] bash $(basename "$0") -R1 READ1_LANE1 READ1_LANE2 -R2 READ2_LANE1 READ2_LANE2 -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f SAMPLE_LANE -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f \"SAMPLE_LANE1 SAMPLE_LANE2\" -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -v bash $(basename "$0") -h bash $(basename "$0") -t=TECHNOLOGY --setup bash $(basename "$0") -t TECHNOLOGY --setup Convert sequencing data (FASTQ) from various platforms for compatibility with 10x Genomics and run cellranger count Loading
