Loading launch_universc.sh +5 −5 Original line number Original line Diff line number Diff line Loading @@ -39,13 +39,13 @@ echo "Running launch_universc.sh in '$SCRIPT_DIR'" #####usage statement##### #####usage statement##### help=' help=' Usage: Usage: bash $(basename "$0") -R1=FILE1 -R2=FILE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1 FILE1 -R2 FILE2 -t TECHNOLOGY -i ID -r REFERENCE [--option OPT] bash $(basename "$0") -R1=READ1_LANE1 READ1_LANE2 -R2=READ2_LANE1 READ2_LANE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1 READ1_LANE1 READ1_LANE2 -R2 READ2_LANE1 READ2_LANE2 -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f=SAMPLE_LANE -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f SAMPLE_LANE -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f=\"SAMPLE_LANE1 SAMPLE_LANE2\" -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f \"SAMPLE_LANE1 SAMPLE_LANE2\" -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -v bash $(basename "$0") -v bash $(basename "$0") -h bash $(basename "$0") -h bash $(basename "$0") -t=TECHNOLOGY --setup bash $(basename "$0") -t TECHNOLOGY --setup Convert sequencing data (FASTQ) from various platforms for compatibility with 10x Genomics and run cellranger count Convert sequencing data (FASTQ) from various platforms for compatibility with 10x Genomics and run cellranger count Loading Loading
launch_universc.sh +5 −5 Original line number Original line Diff line number Diff line Loading @@ -39,13 +39,13 @@ echo "Running launch_universc.sh in '$SCRIPT_DIR'" #####usage statement##### #####usage statement##### help=' help=' Usage: Usage: bash $(basename "$0") -R1=FILE1 -R2=FILE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1 FILE1 -R2 FILE2 -t TECHNOLOGY -i ID -r REFERENCE [--option OPT] bash $(basename "$0") -R1=READ1_LANE1 READ1_LANE2 -R2=READ2_LANE1 READ2_LANE2 -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -R1 READ1_LANE1 READ1_LANE2 -R2 READ2_LANE1 READ2_LANE2 -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f=SAMPLE_LANE -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f SAMPLE_LANE -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -f=\"SAMPLE_LANE1 SAMPLE_LANE2\" -t=TECHNOLOGY -i=ID -r=REFERENCE [--option=OPT] bash $(basename "$0") -f \"SAMPLE_LANE1 SAMPLE_LANE2\" -t TECHNOLOGY -i ID -r REFERENCE [--option=OPT] bash $(basename "$0") -v bash $(basename "$0") -v bash $(basename "$0") -h bash $(basename "$0") -h bash $(basename "$0") -t=TECHNOLOGY --setup bash $(basename "$0") -t TECHNOLOGY --setup Convert sequencing data (FASTQ) from various platforms for compatibility with 10x Genomics and run cellranger count Convert sequencing data (FASTQ) from various platforms for compatibility with 10x Genomics and run cellranger count Loading
