Commit 12f53403 authored by TomKellyGenetics's avatar TomKellyGenetics
Browse files

correct iCELL8 barcode

parent 0557bf77
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+1 −1
Original line number Diff line number Diff line
@@ -830,7 +830,7 @@ if [[ $setup == "true" ]]; then
        fi
        if [[ ! -f iCELL8_barcode.txt ]]; then
            #copy known iCell8 barcodes from convert repo to cellranger install
            rsync -u ${SCRIPT_DIR}/iCell8_barcode.txt iCell8_barcode.txt
            rsync -u ${SCRIPT_DIR}/iCell8_barcode.txt ${DIR}-cs/${VERSION}/lib/python/cellranger/barcodes/iCell8_barcode.txt
            #convert barcode whitelist to match converted barcodes
            sed -i 's/^/AAAAA/g' iCell8_barcodes.txt
            echo " imported expected barcodes for iCELL8 ..."