comment out CLOUPE_PREPROCESS call by detecting full call

#remove 11 lines for cloupe preprocess call

for file in $(grep -l  "call CLOUPE_PREPROCES"  /home/tom/local/bin/cellranger-3.0.2/cellranger-cs/3.0.2/mro/*.mro )

do

num=$(grep -n "call CLOUPE_PREPROCESS" $file |  head -n 1 | cut -d":" -f1); num2=$(($num+10)); echo $num $num2

eval "sed '$(echo "${num},${num2}s/^/#/g")' $file" | grep "PREPROCESS"

num=$(grep -n "call CLOUPE_PREPROCESS" $file |  head -n 1 | cut -d":" -f1)

num2=$(($num +$(tail -n $(echo $(($(wc -l $file | cut -f1 -d " ") - $num))) $file | grep -n ")" | head -n 1 | cut -d":" -f1)))

if [[ $verbose ]]; then

   echo "lines ${num}-${num2} commented out of $file"

fi

eval "sed -i '$(echo "${num},${num2}s/^/#/g")' $file"

done